Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB1P09429 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB1P09429 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB1P09429 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB1P09429 UBE2L2-201ENST00000254302 429 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 SPRR2C-201ENST00000290702 219 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 RNU6-512P-201ENST00000364438 103 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 RN7SKP56-201ENST00000410513 331 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 RNU6-920P-201ENST00000410926 92 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 RNU6-193P-201ENST00000410977 107 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 RPS15AP12-201ENST00000419498 388 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 AC006366.1-201ENST00000422002 759 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 RSL24D1P6-201ENST00000426934 401 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGB1P09429 AF228730.2-201ENST00000438784 848 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 DNAJC19P1-201ENST00000455312 319 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGB1P09429 MIR2116-201ENST00000517221 80 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 SUMO2P20-201ENST00000520803 283 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 PARP1P2-201ENST00000556806 195 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 RPL23AP78-201ENST00000599928 470 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 HMGB1P50-201ENST00000605814 607 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 MIR486-1-201ENST00000612171 68 ntBASIC4.57□□□□□ -1.68
HMGB1P09429 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
HMGB1P09429 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGB1P09429 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HMGB1P09429 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGB1P09429 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 RPS4XP5-202ENST00000449995 1334 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMGB1P09429 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 ELOCP14-201ENST00000428070 331 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB1P09429 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB1P09429 MTND1P28-201ENST00000435623 950 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 ELOCP7-201ENST00000439968 331 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC016696.1-201ENST00000446949 318 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 WASF1P1-201ENST00000447560 1131 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC084198.1-201ENST00000477747 402 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC009901.1-201ENST00000506703 541 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC005178.1-201ENST00000508392 440 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 MTCO1P35-201ENST00000515270 228 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 MTCO1P47-201ENST00000523889 1271 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 AC120057.2-201ENST00000571520 271 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB1P09429 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGB1P09429 AC005498.1-201ENST00000592125 465 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 AL137849.1-201ENST00000604767 169 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 BX664608.1-201ENST00000610519 487 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC034102.8-201ENST00000615146 484 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC090617.7-201ENST00000623952 126 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 AC073530.2-201ENST00000623987 261 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB1P09429 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB1P09429 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB1P09429 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGB1P09429 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGB1P09429 MTND5P29-201ENST00000458676 1807 ntBASIC4.56□□□□□ -1.68
HMGB1P09429 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGB1P09429 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB1P09429 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.55□□□□□ -1.68
HMGB1P09429 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB1P09429 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMGB1P09429 OR1S2-201ENST00000302592 978 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 RNU6-213P-201ENST00000384051 104 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 MIR888-201ENST00000401186 77 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 AL117339.2-201ENST00000430475 180 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 GTF2IP20-201ENST00000431663 360 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 GPM6BP2-201ENST00000432046 144 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 OR4C10P-201ENST00000434991 931 ntBASIC4.55□□□□□ -1.68
HMGB1P09429 GPM6BP1-201ENST00000446387 144 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms