Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC073346.2-201ENST00000624724 2058 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
CXCL1P09341 MTCO1P18-201ENST00000455518 1419 ntBASIC1.66□□□□□ -2.14
CXCL1P09341 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
CXCL1P09341 FAM133CP-201ENST00000332869 704 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 SNORA38-201ENST00000363946 132 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 MIR670-201ENST00000390142 98 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 NPM1P10-201ENST00000398310 865 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 GTF2IP20-201ENST00000431663 360 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC018634.1-201ENST00000437554 401 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.65□□□□□ -2.15
CXCL1P09341 AC104978.1-201ENST00000449387 391 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 TRGVB-201ENST00000453257 471 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC097493.1-201ENST00000463958 372 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC090453.1-201ENST00000495560 436 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC104108.1-201ENST00000509930 412 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 RNU6-760P-201ENST00000516078 97 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 RNA5SP200-201ENST00000516360 103 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 RNU6-928P-201ENST00000516876 104 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 ZNF705CP-201ENST00000530515 889 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC021269.2-201ENST00000532318 330 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 AL049838.1-201ENST00000563647 981 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 LRRC37A5P-203ENST00000580181 585 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 AC013444.2-201ENST00000603317 787 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.65□□□□□ -2.15
CXCL1P09341 OR2AS2P-201ENST00000606902 342 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 AC005332.10-201ENST00000612725 619 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 MIR6132-201ENST00000622083 109 ntBASIC1.65□□□□□ -2.15
CXCL1P09341 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.65□□□□□ -2.15
CXCL1P09341 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CXCL1P09341 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CXCL1P09341 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CXCL1P09341 RNU6-252P-201ENST00000363232 107 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 SNORA3A-201ENST00000364113 130 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 SNORA27.3-201ENST00000364937 134 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 RNA5SP489-201ENST00000410986 109 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AL133384.1-201ENST00000412744 351 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AL356379.1-201ENST00000414105 126 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.64□□□□□ -2.15
CXCL1P09341 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC005005.2-201ENST00000420779 380 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC007560.1-201ENST00000426912 237 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.64□□□□□ -2.15
CXCL1P09341 ARF4P4-201ENST00000439608 520 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 RPL23AP16-201ENST00000441715 421 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.64□□□□□ -2.15
CXCL1P09341 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.64□□□□□ -2.15
CXCL1P09341 ANKRD26P4-201ENST00000455755 950 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL1P09341 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC096571.1-202ENST00000506634 735 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC006390.1-201ENST00000508068 283 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.64□□□□□ -2.15
CXCL1P09341 RNU6-1282P-201ENST00000516735 96 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 SCARNA11.3-201ENST00000517276 130 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.64□□□□□ -2.15
CXCL1P09341 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.64□□□□□ -2.15
CXCL1P09341 AC068135.2-201ENST00000569293 1028 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC105224.1-201ENST00000587055 421 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 SNORD14A-201ENST00000606526 91 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AL356585.4-201ENST00000623078 1229 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC073308.1-201ENST00000623696 305 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 MIR7515-201ENST00000637837 67 ntBASIC1.64□□□□□ -2.15
CXCL1P09341 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CXCL1P09341 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CXCL1P09341 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CXCL1P09341 OR5J1P-201ENST00000313544 939 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AL121978.1-201ENST00000402778 359 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 RPS3AP24-201ENST00000407896 734 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 SNORD23.1-201ENST00000408212 104 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 RNU2-52P-201ENST00000410680 190 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 USP12PX-201ENST00000432383 1057 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 TAAR7P-201ENST00000436141 242 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AC000041.1-201ENST00000439655 175 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.63□□□□□ -2.15
CXCL1P09341 Z82190.1-201ENST00000454534 490 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 AC093767.1-201ENST00000504523 156 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.63□□□□□ -2.15
CXCL1P09341 RN7SKP132-201ENST00000516001 208 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 RN7SKP31-201ENST00000516354 278 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 OR5AK1P-201ENST00000524837 922 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
CXCL1P09341 UBTFL10-201ENST00000528532 562 ntBASIC1.63□□□□□ -2.15
CXCL1P09341 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms