Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 LINC00888-204ENST00000487386 421 ntBASIC3.24□□□□□ -1.89
VIMP08670 AC135721.1-201ENST00000497954 479 ntBASIC3.24□□□□□ -1.89
VIMP08670 MTCYBP35-201ENST00000503630 1137 ntBASIC3.24□□□□□ -1.89
VIMP08670 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.24□□□□□ -1.89
VIMP08670 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.24□□□□□ -1.89
VIMP08670 ZNF321P-202ENST00000550843 495 ntBASIC3.24□□□□□ -1.89
VIMP08670 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.24□□□□□ -1.89
VIMP08670 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.24□□□□□ -1.89
VIMP08670 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.24□□□□□ -1.89
VIMP08670 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.24□□□□□ -1.89
VIMP08670 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.24□□□□□ -1.89
VIMP08670 AL627309.6-201ENST00000606857 840 ntBASIC3.24□□□□□ -1.89
VIMP08670 AC090132.2-201ENST00000615881 347 ntBASIC3.24□□□□□ -1.89
VIMP08670 AL355493.4-201ENST00000618530 292 ntBASIC3.24□□□□□ -1.89
VIMP08670 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.24□□□□□ -1.89
VIMP08670 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.24□□□□□ -1.89
VIMP08670 AC007671.2-201ENST00000637344 619 ntBASIC3.24□□□□□ -1.89
VIMP08670 DDX10P1-201ENST00000448545 1933 ntBASIC3.24□□□□□ -1.89
VIMP08670 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.24□□□□□ -1.89
VIMP08670 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VIMP08670 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VIMP08670 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VIMP08670 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VIMP08670 AP000568.1-201ENST00000282964 442 ntBASIC3.23□□□□□ -1.89
VIMP08670 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VIMP08670 MIR372-201ENST00000362225 67 ntBASIC3.23□□□□□ -1.89
VIMP08670 RNU1-70P-201ENST00000362618 164 ntBASIC3.23□□□□□ -1.89
VIMP08670 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
VIMP08670 SNORA23-201ENST00000365128 182 ntBASIC3.23□□□□□ -1.89
VIMP08670 RNU6-432P-201ENST00000384196 109 ntBASIC3.23□□□□□ -1.89
VIMP08670 SNORA1.3-201ENST00000384676 136 ntBASIC3.23□□□□□ -1.89
VIMP08670 RNU6-754P-201ENST00000391166 107 ntBASIC3.23□□□□□ -1.89
VIMP08670 AC119751.3-201ENST00000399720 670 ntBASIC3.23□□□□□ -1.89
VIMP08670 ATP5A1P2-201ENST00000412323 255 ntBASIC3.23□□□□□ -1.89
VIMP08670 RAP1BP1-201ENST00000412709 553 ntBASIC3.23□□□□□ -1.89
VIMP08670 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 AL593851.1-201ENST00000426171 157 ntBASIC3.23□□□□□ -1.89
VIMP08670 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.23□□□□□ -1.89
VIMP08670 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 COX6CP2-201ENST00000444980 225 ntBASIC3.23□□□□□ -1.89
VIMP08670 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VIMP08670 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.23□□□□□ -1.89
VIMP08670 GMPSP1-201ENST00000514075 579 ntBASIC3.23□□□□□ -1.89
VIMP08670 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VIMP08670 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
VIMP08670 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
VIMP08670 AC005951.2-201ENST00000576282 495 ntBASIC3.23□□□□□ -1.89
VIMP08670 AC093227.2-201ENST00000589357 285 ntBASIC3.23□□□□□ -1.89
VIMP08670 AC010591.1-201ENST00000603941 649 ntBASIC3.23□□□□□ -1.89
VIMP08670 AC106791.2-201ENST00000604680 391 ntBASIC3.23□□□□□ -1.89
VIMP08670 AL355816.2-201ENST00000610049 647 ntBASIC3.23□□□□□ -1.89
VIMP08670 MIR4275-201ENST00000636486 87 ntBASIC3.23□□□□□ -1.89
VIMP08670 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VIMP08670 AC092447.7-201ENST00000422212 1621 ntBASIC3.22□□□□□ -1.89
VIMP08670 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.22□□□□□ -1.89
VIMP08670 AC092125.1-201ENST00000562568 1995 ntBASIC3.22□□□□□ -1.89
VIMP08670 RNU1-39P-201ENST00000383897 165 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 RSL24D1P6-201ENST00000426934 401 ntBASIC3.22□□□□□ -1.89
VIMP08670 RPL7L1P10-201ENST00000427790 463 ntBASIC3.22□□□□□ -1.89
VIMP08670 OR4C10P-201ENST00000434991 931 ntBASIC3.22□□□□□ -1.89
VIMP08670 AL831737.1-201ENST00000441288 271 ntBASIC3.22□□□□□ -1.89
VIMP08670 MTND5P2-201ENST00000442927 1142 ntBASIC3.22□□□□□ -1.89
VIMP08670 MTND2P24-201ENST00000453434 806 ntBASIC3.22□□□□□ -1.89
VIMP08670 HSPD1P15-201ENST00000505573 1122 ntBASIC3.22□□□□□ -1.89
VIMP08670 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
VIMP08670 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
VIMP08670 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
VIMP08670 RNU6-840P-201ENST00000517275 65 ntBASIC3.22□□□□□ -1.89
VIMP08670 HMGN1P28-201ENST00000521340 364 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.22□□□□□ -1.89
VIMP08670 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.22□□□□□ -1.89
VIMP08670 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VIMP08670 AC002400.1-201ENST00000569310 726 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.22□□□□□ -1.89
VIMP08670 AC008751.2-201ENST00000597885 980 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC013553.2-201ENST00000604244 589 ntBASIC3.22□□□□□ -1.89
VIMP08670 HSPE1P7-201ENST00000604681 321 ntBASIC3.22□□□□□ -1.89
VIMP08670 AL139344.1-201ENST00000605228 195 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC107214.2-201ENST00000608204 634 ntBASIC3.22□□□□□ -1.89
VIMP08670 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VIMP08670 AC140725.3-201ENST00000616193 880 ntBASIC3.22□□□□□ -1.89
VIMP08670 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 AC027309.3-201ENST00000623419 351 ntBASIC3.22□□□□□ -1.89
VIMP08670 AC112204.3-201ENST00000623822 332 ntBASIC3.22□□□□□ -1.89
VIMP08670 SDAD1P2-201ENST00000441308 2028 ntBASIC3.22□□□□□ -1.89
VIMP08670 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
VIMP08670 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.22□□□□□ -1.89
VIMP08670 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.22□□□□□ -1.89
VIMP08670 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
VIMP08670 CCT4P2-201ENST00000233836 1548 ntBASIC3.21□□□□□ -1.9
VIMP08670 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
VIMP08670 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms