Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 OR8L1P-201ENST00000534005 955 ntBASIC3.81□□□□□ -1.8
MMP3P08254 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP3P08254 RPL21P5-201ENST00000554662 472 ntBASIC3.81□□□□□ -1.8
MMP3P08254 EIF1P4-201ENST00000572664 335 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AC090615.1-201ENST00000577519 154 ntBASIC3.81□□□□□ -1.8
MMP3P08254 CKS1BP3-201ENST00000600888 237 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AL139395.1-201ENST00000603662 160 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AC004853.1-201ENST00000604902 698 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AL391813.2-201ENST00000609113 322 ntBASIC3.81□□□□□ -1.8
MMP3P08254 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 AC079597.1-201ENST00000624306 508 ntBASIC3.81□□□□□ -1.8
MMP3P08254 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.81□□□□□ -1.8
MMP3P08254 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MMP3P08254 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.8□□□□□ -1.8
MMP3P08254 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MMP3P08254 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
MMP3P08254 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
MMP3P08254 RNU6-97P-201ENST00000363387 104 ntBASIC3.8□□□□□ -1.8
MMP3P08254 RNU6-1042P-201ENST00000384204 107 ntBASIC3.8□□□□□ -1.8
MMP3P08254 RPL7P25-201ENST00000404151 721 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL359704.1-201ENST00000411586 781 ntBASIC3.8□□□□□ -1.8
MMP3P08254 SPA17P1-201ENST00000416656 452 ntBASIC3.8□□□□□ -1.8
MMP3P08254 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 MTND1P4-201ENST00000435196 415 ntBASIC3.8□□□□□ -1.8
MMP3P08254 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 PGBD4P3-201ENST00000440731 581 ntBASIC3.8□□□□□ -1.8
MMP3P08254 MTND6P13-201ENST00000443510 523 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.8□□□□□ -1.8
MMP3P08254 SNRPFP4-201ENST00000456366 242 ntBASIC3.8□□□□□ -1.8
MMP3P08254 snoU109.1-201ENST00000459339 135 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL049873.1-201ENST00000480540 376 ntBASIC3.8□□□□□ -1.8
MMP3P08254 MTND1P3-201ENST00000484956 952 ntBASIC3.8□□□□□ -1.8
MMP3P08254 RPL7P23-201ENST00000493874 747 ntBASIC3.8□□□□□ -1.8
MMP3P08254 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 RNU6-1003P-201ENST00000517099 105 ntBASIC3.8□□□□□ -1.8
MMP3P08254 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
MMP3P08254 AP006245.1-201ENST00000522549 120 ntBASIC3.8□□□□□ -1.8
MMP3P08254 OR4R3P-201ENST00000525084 838 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 AC027807.1-201ENST00000559921 996 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.8□□□□□ -1.8
MMP3P08254 UBE2L4-201ENST00000587688 464 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL669831.4-202ENST00000590817 238 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC107304.1-201ENST00000604229 296 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL365503.1-201ENST00000605247 905 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC091834.1-201ENST00000614543 472 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP3P08254 AL596245.1-201ENST00000618994 362 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
MMP3P08254 AL158801.5-201ENST00000623123 465 ntBASIC3.8□□□□□ -1.8
MMP3P08254 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MMP3P08254 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP3P08254 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
MMP3P08254 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP3P08254 AC092447.10-201ENST00000620607 1652 ntBASIC3.79□□□□□ -1.8
MMP3P08254 ZNF33CP-201ENST00000432492 2030 ntBASIC3.79□□□□□ -1.8
MMP3P08254 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
MMP3P08254 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MMP3P08254 RNA5SP258-201ENST00000362750 119 ntBASIC3.79□□□□□ -1.8
MMP3P08254 RNU6-259P-201ENST00000383999 107 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AL122016.1-201ENST00000403365 367 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AL357075.1-201ENST00000404107 726 ntBASIC3.79□□□□□ -1.8
MMP3P08254 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.79□□□□□ -1.8
MMP3P08254 AC078974.1-201ENST00000411597 223 ntBASIC3.79□□□□□ -1.8
MMP3P08254 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP3P08254 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP3P08254 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP3P08254 AC092447.6-201ENST00000414578 210 ntBASIC3.79□□□□□ -1.8
MMP3P08254 ELOCP17-201ENST00000414751 326 ntBASIC3.79□□□□□ -1.8
MMP3P08254 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms