Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PDGFBP01127 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 RNU6-28P-201ENST00000362378 107 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 RPL23AP29-201ENST00000397284 453 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 DHFRP6-201ENST00000401776 268 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 NDUFB4P6-201ENST00000436819 366 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFBP01127 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC234775.1-201ENST00000454247 670 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 RPL18AP17-201ENST00000455326 198 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 AL359385.1-201ENST00000456509 365 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 RPL23AP14-201ENST00000468281 468 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFBP01127 FAM172BP-201ENST00000487497 1089 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 KCTD9P5-201ENST00000504141 1170 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 MRPS36P3-201ENST00000519284 130 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFBP01127 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC106791.2-201ENST00000604680 391 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 AL139344.1-201ENST00000605228 195 ntBASIC3.2□□□□□ -1.9
PDGFBP01127 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFBP01127 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFBP01127 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFBP01127 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFBP01127 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PDGFBP01127 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 AC087359.1-201ENST00000508335 1740 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AL513302.2-201ENST00000562313 1842 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PDGFBP01127 AC005005.2-201ENST00000420779 380 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.19□□□□□ -1.9
PDGFBP01127 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.19□□□□□ -1.9
PDGFBP01127 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.19□□□□□ -1.9
PDGFBP01127 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.19□□□□□ -1.9
PDGFBP01127 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 ACTG1P13-201ENST00000486987 1043 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.19□□□□□ -1.9
PDGFBP01127 AC104090.1-201ENST00000506341 1171 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 RNU1-41P-201ENST00000516161 162 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 RNU1-48P-201ENST00000516400 162 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 RNU5A-4P-201ENST00000516588 111 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 DUXAP1-201ENST00000556632 463 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
PDGFBP01127 AL354943.1-201ENST00000572103 781 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
PDGFBP01127 BNIP3P38-201ENST00000601117 544 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AL035413.2-201ENST00000604801 525 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AP000254.1-201ENST00000609934 520 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC245297.2-201ENST00000610119 565 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC099778.2-201ENST00000610904 211 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AC008121.2-201ENST00000614647 523 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 AL357080.1-201ENST00000617394 239 ntBASIC3.19□□□□□ -1.9
PDGFBP01127 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
PDGFBP01127 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFBP01127 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PDGFBP01127 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 AL390862.1-201ENST00000635467 1469 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 XGY1-201ENST00000381172 446 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 RNU6-157P-201ENST00000383957 107 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 SNORA18.3-201ENST00000384122 132 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 TAS2R15P-201ENST00000390674 928 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 RPL30P2-201ENST00000414021 291 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC011233.1-201ENST00000422812 283 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC234781.2-201ENST00000426370 994 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms