Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
POLR1AO95602 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.22□□□□□ -2.05
POLR1AO95602 MED6P1-201ENST00000439659 713 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.22□□□□□ -2.05
POLR1AO95602 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.22□□□□□ -2.05
POLR1AO95602 RNU2-58P-201ENST00000516403 183 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.22□□□□□ -2.05
POLR1AO95602 AC116447.1-201ENST00000613153 453 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AL354685.2-201ENST00000448218 1447 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
POLR1AO95602 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
POLR1AO95602 AL030996.1-201ENST00000411430 235 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 RPS15AP1-201ENST00000457423 391 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 AC096571.1-202ENST00000506634 735 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 SNORA31.24-201ENST00000517232 57 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.21□□□□□ -2.06
POLR1AO95602 AC006023.2-201ENST00000609916 167 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 ZNF209P-201ENST00000593450 2304 ntBASIC2.21□□□□□ -2.06
POLR1AO95602 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.21□□□□□ -2.06
POLR1AO95602 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.21□□□□□ -2.06
POLR1AO95602 AC011477.1-204ENST00000623416 1325 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AP000873.1-201ENST00000463987 400 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1AO95602 AC107398.1-201ENST00000486904 505 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC006499.2-201ENST00000513470 337 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.2□□□□□ -2.06
POLR1AO95602 TRAV28-201ENST00000557548 323 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC091057.2-201ENST00000602594 792 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC136443.5-201ENST00000603741 370 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
POLR1AO95602 U8.1-201ENST00000362843 134 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 MIR124-3-201ENST00000384866 87 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 MIR517C-201ENST00000385103 95 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 XKRYP6-201ENST00000440468 1116 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 XKRYP3-201ENST00000442113 1116 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 KATNBL1P3-201ENST00000443475 909 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1AO95602 HMGB3P30-201ENST00000457863 606 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC010625.1-201ENST00000511296 403 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1AO95602 MIR151B-201ENST00000584249 96 ntBASIC2.2□□□□□ -2.06
POLR1AO95602 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.2□□□□□ -2.06
POLR1AO95602 DEFB109C-201ENST00000382575 264 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 DEFB109B-201ENST00000382656 264 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 GTF2IP7-202ENST00000436677 309 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 RAB9AP5-201ENST00000437794 597 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 RAB9AP2-201ENST00000443911 597 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 SNORD121B-201ENST00000458838 81 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.19□□□□□ -2.06
POLR1AO95602 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.19□□□□□ -2.06
POLR1AO95602 AC087808.1-201ENST00000520501 361 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.19□□□□□ -2.06
POLR1AO95602 AC121761.2-201ENST00000617300 689 ntBASIC2.19□□□□□ -2.06
POLR1AO95602 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
POLR1AO95602 U3.15-201ENST00000365398 212 ntBASIC2.18□□□□□ -2.06
POLR1AO95602 POLR2J4-204ENST00000418424 324 ntBASIC2.18□□□□□ -2.06
POLR1AO95602 MORF4L1P7-201ENST00000426038 703 ntBASIC2.18□□□□□ -2.06
POLR1AO95602 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.18□□□□□ -2.06
POLR1AO95602 AL731537.2-201ENST00000561565 951 ntBASIC2.18□□□□□ -2.06
POLR1AO95602 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.18□□□□□ -2.06
POLR1AO95602 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.18□□□□□ -2.06
POLR1AO95602 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1AO95602 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1AO95602 AC074117.2-201ENST00000417130 397 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 HSPE1P22-201ENST00000456856 327 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.17□□□□□ -2.06
POLR1AO95602 AC034222.1-201ENST00000494052 532 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 MTCO1P30-201ENST00000515244 580 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 IGKV2D-36-201ENST00000518643 226 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.17□□□□□ -2.06
POLR1AO95602 AC068944.2-201ENST00000610373 403 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1AO95602 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
POLR1AO95602 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1AO95602 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1AO95602 MTCO1P43-201ENST00000431831 488 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.17□□□□□ -2.06
POLR1AO95602 AP001804.3-201ENST00000525146 880 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 AL137100.2-201ENST00000555786 315 ntBASIC2.17□□□□□ -2.06
POLR1AO95602 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.17□□□□□ -2.06
POLR1AO95602 AC114546.3-201ENST00000623582 1734 ntBASIC2.16□□□□□ -2.06
POLR1AO95602 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
POLR1AO95602 RNU6-461P-201ENST00000364195 107 ntBASIC2.16□□□□□ -2.06
POLR1AO95602 RNU4-51P-201ENST00000364206 140 ntBASIC2.16□□□□□ -2.06
POLR1AO95602 RPL5P19-201ENST00000404228 893 ntBASIC2.16□□□□□ -2.06
POLR1AO95602 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1AO95602 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1AO95602 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1AO95602 AC080078.3-201ENST00000605407 463 ntBASIC2.16□□□□□ -2.06
POLR1AO95602 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1AO95602 XKRY2-202ENST00000623874 1581 ntBASIC2.15□□□□□ -2.06
POLR1AO95602 XKRY-202ENST00000624960 1581 ntBASIC2.15□□□□□ -2.06
POLR1AO95602 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
POLR1AO95602 SNORA67.6-201ENST00000391093 99 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 AC099336.2-201ENST00000422457 254 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 OR10R1P-201ENST00000441524 1141 ntBASIC2.15□□□□□ -2.07
POLR1AO95602 AL136380.1-201ENST00000447970 162 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms