Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SDAD1P2-201ENST00000441308 2028 ntBASIC1.4□□□□□ -2.18
SIX6O95475 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SIX6O95475 SNORD46.1-201ENST00000364139 104 ntBASIC1.4□□□□□ -2.19
SIX6O95475 RNU6-339P-201ENST00000384310 107 ntBASIC1.4□□□□□ -2.19
SIX6O95475 U3.20-201ENST00000390909 217 ntBASIC1.4□□□□□ -2.19
SIX6O95475 U3.29-201ENST00000391296 212 ntBASIC1.4□□□□□ -2.19
SIX6O95475 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 AL160175.1-201ENST00000428124 247 ntBASIC1.4□□□□□ -2.19
SIX6O95475 YWHAZP8-201ENST00000436935 731 ntBASIC1.4□□□□□ -2.19
SIX6O95475 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SIX6O95475 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 AP001486.1-201ENST00000463339 476 ntBASIC1.4□□□□□ -2.19
SIX6O95475 AC104687.1-201ENST00000485829 412 ntBASIC1.4□□□□□ -2.19
SIX6O95475 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 AC111193.1-201ENST00000504097 155 ntBASIC1.4□□□□□ -2.19
SIX6O95475 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SIX6O95475 COL6A4P2-205ENST00000509855 506 ntBASIC1.4□□□□□ -2.19
SIX6O95475 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.4□□□□□ -2.19
SIX6O95475 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.4□□□□□ -2.19
SIX6O95475 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.4□□□□□ -2.19
SIX6O95475 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.4□□□□□ -2.19
SIX6O95475 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
SIX6O95475 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
SIX6O95475 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.4□□□□□ -2.19
SIX6O95475 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.4□□□□□ -2.19
SIX6O95475 MTND5P10-201ENST00000603719 1809 ntBASIC1.4□□□□□ -2.19
SIX6O95475 SNORA80A-201ENST00000363922 136 ntBASIC1.39□□□□□ -2.19
SIX6O95475 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
SIX6O95475 RNU4-31P-201ENST00000384211 141 ntBASIC1.39□□□□□ -2.19
SIX6O95475 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX6O95475 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX6O95475 AL365496.1-201ENST00000426885 215 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AC007560.1-201ENST00000426912 237 ntBASIC1.39□□□□□ -2.19
SIX6O95475 RPL7L1P10-201ENST00000427790 463 ntBASIC1.39□□□□□ -2.19
SIX6O95475 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.39□□□□□ -2.19
SIX6O95475 ARPC3P1-201ENST00000437218 533 ntBASIC1.39□□□□□ -2.19
SIX6O95475 ELOCP3-201ENST00000439303 348 ntBASIC1.39□□□□□ -2.19
SIX6O95475 ARF4P4-201ENST00000439608 520 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX6O95475 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIX6O95475 OR6K5P-201ENST00000447050 945 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AC004022.1-201ENST00000447766 1066 ntBASIC1.39□□□□□ -2.19
SIX6O95475 ANKRD26P4-201ENST00000455755 950 ntBASIC1.39□□□□□ -2.19
SIX6O95475 PNPLA4P1-201ENST00000458328 305 ntBASIC1.39□□□□□ -2.19
SIX6O95475 HMGN1P8-201ENST00000463578 288 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AC096745.1-201ENST00000509945 370 ntBASIC1.39□□□□□ -2.19
SIX6O95475 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX6O95475 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.39□□□□□ -2.19
SIX6O95475 ATP5F1P5-201ENST00000526403 760 ntBASIC1.39□□□□□ -2.19
SIX6O95475 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.39□□□□□ -2.19
SIX6O95475 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.39□□□□□ -2.19
SIX6O95475 NTAN1P1-201ENST00000603150 646 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AL355812.1-201ENST00000603215 216 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AC026790.2-201ENST00000606282 430 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AP005137.2-201ENST00000609238 400 ntBASIC1.39□□□□□ -2.19
SIX6O95475 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.39□□□□□ -2.19
SIX6O95475 MIR219B-201ENST00000637023 88 ntBASIC1.39□□□□□ -2.19
SIX6O95475 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SIX6O95475 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SIX6O95475 RNU6-989P-201ENST00000362756 107 ntBASIC1.38□□□□□ -2.19
SIX6O95475 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SIX6O95475 RNU6-1074P-201ENST00000383995 104 ntBASIC1.38□□□□□ -2.19
SIX6O95475 MIR767-201ENST00000390228 109 ntBASIC1.38□□□□□ -2.19
SIX6O95475 SNRPEP2-201ENST00000397592 279 ntBASIC1.38□□□□□ -2.19
SIX6O95475 DSTNP4-201ENST00000399472 474 ntBASIC1.38□□□□□ -2.19
SIX6O95475 CIR1P3-201ENST00000405137 479 ntBASIC1.38□□□□□ -2.19
SIX6O95475 RPS15AP38-201ENST00000413110 372 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.38□□□□□ -2.19
SIX6O95475 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 Z98742.2-201ENST00000431564 187 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.38□□□□□ -2.19
SIX6O95475 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 OSTCP8-201ENST00000445117 448 ntBASIC1.38□□□□□ -2.19
SIX6O95475 WASF1P1-201ENST00000447560 1131 ntBASIC1.38□□□□□ -2.19
SIX6O95475 BX248409.1-201ENST00000455497 255 ntBASIC1.38□□□□□ -2.19
SIX6O95475 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
SIX6O95475 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC096576.1-201ENST00000489014 359 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC106872.3-201ENST00000495104 446 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC022447.3-201ENST00000506865 495 ntBASIC1.38□□□□□ -2.19
SIX6O95475 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SIX6O95475 AC107393.1-201ENST00000512403 346 ntBASIC1.38□□□□□ -2.19
SIX6O95475 MRPS36P2-201ENST00000512569 299 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 SNORA70.24-201ENST00000517233 118 ntBASIC1.38□□□□□ -2.19
SIX6O95475 EEF1A1P37-201ENST00000522748 715 ntBASIC1.38□□□□□ -2.19
SIX6O95475 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.38□□□□□ -2.19
SIX6O95475 HSBP1P1-201ENST00000555205 166 ntBASIC1.38□□□□□ -2.19
SIX6O95475 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 LARP7P3-201ENST00000579888 337 ntBASIC1.38□□□□□ -2.19
SIX6O95475 MIR3616-201ENST00000584070 92 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.38□□□□□ -2.19
SIX6O95475 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.38□□□□□ -2.19
SIX6O95475 DPRXP5-201ENST00000604662 539 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AL355297.2-201ENST00000604792 129 ntBASIC1.38□□□□□ -2.19
SIX6O95475 AC079395.3-201ENST00000615161 484 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms