Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 U73023.1-201ENST00000603134 700 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC008121.3-201ENST00000618726 433 ntBASIC0.7□□□□□ -2.3
USH2AO75445 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 MIR1183-201ENST00000408856 89 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AL513185.2-201ENST00000425543 193 ntBASIC0.7□□□□□ -2.3
USH2AO75445 SAR1AP4-201ENST00000429225 591 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 TPRKBP1-201ENST00000456243 481 ntBASIC0.7□□□□□ -2.3
USH2AO75445 MTCYBP37-201ENST00000510642 1133 ntBASIC0.7□□□□□ -2.3
USH2AO75445 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USH2AO75445 RNU11-2P-201ENST00000516898 142 ntBASIC0.7□□□□□ -2.3
USH2AO75445 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.7□□□□□ -2.3
USH2AO75445 AL592494.3-201ENST00000609485 464 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AL445493.3-201ENST00000619568 477 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AL596028.1-201ENST00000326971 197 ntBASIC0.7□□□□□ -2.3
USH2AO75445 MTCO3P30-201ENST00000426425 670 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC090774.1-201ENST00000435925 246 ntBASIC0.7□□□□□ -2.3
USH2AO75445 RPL23AP7-203ENST00000449021 469 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AL049830.2-201ENST00000480072 201 ntBASIC0.7□□□□□ -2.3
USH2AO75445 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.7□□□□□ -2.3
USH2AO75445 AC060766.3-201ENST00000591442 263 ntBASIC0.7□□□□□ -2.3
USH2AO75445 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC0.69□□□□□ -2.3
USH2AO75445 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.69□□□□□ -2.3
USH2AO75445 MRPS36P1-201ENST00000421291 307 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC0.69□□□□□ -2.3
USH2AO75445 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 AL161713.1-201ENST00000555538 145 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC012078.1-201ENST00000405035 1646 ntBASIC0.69□□□□□ -2.3
USH2AO75445 CD3D-202ENST00000392884 476 ntTSL 2 BASIC0.69□□□□□ -2.3
USH2AO75445 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 AC004486.1-201ENST00000546846 233 ntBASIC0.69□□□□□ -2.3
USH2AO75445 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
USH2AO75445 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.69□□□□□ -2.3
USH2AO75445 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.69□□□□□ -2.3
USH2AO75445 MTND4P13-201ENST00000402078 1023 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AF274854.1-201ENST00000413236 615 ntBASIC0.69□□□□□ -2.3
USH2AO75445 DPPA2P1-201ENST00000428060 556 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.69□□□□□ -2.3
USH2AO75445 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC0.69□□□□□ -2.3
USH2AO75445 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 POU5F1P7-201ENST00000508759 541 ntBASIC0.69□□□□□ -2.3
USH2AO75445 RN7SKP265-201ENST00000516448 223 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC0.69□□□□□ -2.3
USH2AO75445 AC007229.1-201ENST00000590455 412 ntBASIC0.69□□□□□ -2.3
USH2AO75445 MIR8087-201ENST00000612745 78 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 SNORA67.6-201ENST00000391093 99 ntBASIC0.69□□□□□ -2.3
USH2AO75445 RN7SKP101-201ENST00000411376 320 ntBASIC0.69□□□□□ -2.3
USH2AO75445 USP9YP33-201ENST00000412220 421 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC244636.1-201ENST00000421152 228 ntBASIC0.69□□□□□ -2.3
USH2AO75445 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.69□□□□□ -2.3
USH2AO75445 USP9YP35-201ENST00000435696 412 ntBASIC0.69□□□□□ -2.3
USH2AO75445 HIGD1AP11-201ENST00000438361 280 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 BNIP3P26-201ENST00000600827 554 ntBASIC0.69□□□□□ -2.3
USH2AO75445 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.69□□□□□ -2.3
USH2AO75445 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
USH2AO75445 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC0.68□□□□□ -2.3
USH2AO75445 AL030996.1-201ENST00000411430 235 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.68□□□□□ -2.3
USH2AO75445 AC090071.1-201ENST00000507713 644 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AC066616.2-201ENST00000559334 1481 ntBASIC0.68□□□□□ -2.3
USH2AO75445 Y_RNA.142-201ENST00000363491 102 ntBASIC0.68□□□□□ -2.3
USH2AO75445 BX510359.4-201ENST00000423750 193 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AC129850.1-201ENST00000436203 508 ntBASIC0.68□□□□□ -2.3
USH2AO75445 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
USH2AO75445 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.68□□□□□ -2.3
USH2AO75445 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.68□□□□□ -2.3
USH2AO75445 AGGF1P8-201ENST00000562979 1000 ntBASIC0.68□□□□□ -2.3
USH2AO75445 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC0.68□□□□□ -2.3
USH2AO75445 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
USH2AO75445 FO624990.1-201ENST00000636373 85 ntBASIC0.68□□□□□ -2.3
USH2AO75445 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
USH2AO75445 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.68□□□□□ -2.3
USH2AO75445 SNORD48-201ENST00000364953 64 ntBASIC0.68□□□□□ -2.3
USH2AO75445 MTCO3P31-201ENST00000405526 789 ntBASIC0.68□□□□□ -2.3
USH2AO75445 EXTL2P1-201ENST00000446218 416 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC0.68□□□□□ -2.3
USH2AO75445 AC087373.1-201ENST00000524920 491 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AP003497.1-201ENST00000528472 562 ntBASIC0.68□□□□□ -2.3
USH2AO75445 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.68□□□□□ -2.3
USH2AO75445 SNORD53B-201ENST00000577887 78 ntBASIC0.68□□□□□ -2.3
USH2AO75445 MKKS-204ENST00000639674 192 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AC002546.1-201ENST00000588041 2504 ntBASIC0.68□□□□□ -2.3
USH2AO75445 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
USH2AO75445 XKRY2-201ENST00000442362 1093 ntBASIC0.68□□□□□ -2.3
USH2AO75445 LAMTOR5P1-201ENST00000444290 270 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AL021397.1-201ENST00000451806 248 ntBASIC0.68□□□□□ -2.3
USH2AO75445 GSTA11P-201ENST00000452866 669 ntBASIC0.68□□□□□ -2.3
USH2AO75445 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC0.68□□□□□ -2.3
USH2AO75445 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC0.68□□□□□ -2.3
USH2AO75445 CD69-203ENST00000536709 1020 ntTSL 2 BASIC0.68□□□□□ -2.3
USH2AO75445 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC0.68□□□□□ -2.3
USH2AO75445 AL137847.3-201ENST00000611521 109 ntBASIC0.68□□□□□ -2.3
USH2AO75445 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
USH2AO75445 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 RNU6-984P-201ENST00000363236 109 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms