Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SLC25A15P5-201ENST00000508033 253 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCD1O75127 SMURF2P1-201ENST00000514992 481 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RNU6-406P-201ENST00000516470 107 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCD1O75127 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCD1O75127 MIR4716-201ENST00000579628 84 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 CYP2C61P-201ENST00000604072 290 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 AL008729.2-201ENST00000606393 473 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 DUSP12P1-201ENST00000612874 516 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 RNA5SP196-201ENST00000625967 102 ntBASIC5.84□□□□□ -1.47
PTCD1O75127 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCD1O75127 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCD1O75127 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTCD1O75127 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTCD1O75127 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTCD1O75127 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 AC092376.2-201ENST00000622621 4116 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AC000374.1-201ENST00000434698 1745 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 XIAPP3-201ENST00000312918 795 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 Y_RNA.149-201ENST00000363558 117 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RNU6-82P-201ENST00000363970 107 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RNU1-132P-201ENST00000364300 164 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RNA5SP366-201ENST00000365454 123 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCD1O75127 SNORA48.7-201ENST00000391302 135 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RPS26P8-201ENST00000393490 348 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 SDHCP2-201ENST00000398565 501 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AC007738.1-201ENST00000413892 348 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL590609.2-201ENST00000421430 368 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL391219.1-201ENST00000422570 483 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCD1O75127 AC008267.5-201ENST00000424928 265 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCD1O75127 BTF3P6-201ENST00000448054 499 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCD1O75127 RPL30P15-201ENST00000457129 321 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 SCARNA18-201ENST00000459004 134 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AC068781.1-201ENST00000488231 618 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RPS27P27-201ENST00000498779 255 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCD1O75127 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 HIGD1AP3-201ENST00000515857 278 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RN7SKP82-201ENST00000516786 223 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RNU6-988P-201ENST00000519081 107 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCD1O75127 AC138761.3-201ENST00000579993 334 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL355812.1-201ENST00000603215 216 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL670379.11-201ENST00000604059 253 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL670379.10-201ENST00000604330 253 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL670379.12-201ENST00000605291 253 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL670379.9-201ENST00000605428 253 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 RMST_9.1-201ENST00000619945 193 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL589994.2-201ENST00000621124 579 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 MIR3653-201ENST00000625572 110 ntBASIC5.83□□□□□ -1.48
PTCD1O75127 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCD1O75127 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCD1O75127 MTND5P27-201ENST00000428871 1720 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCD1O75127 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTCD1O75127 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AC027228.2-201ENST00000567141 2154 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD1O75127 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD1O75127 RNU6-989P-201ENST00000362756 107 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNU6-209P-201ENST00000384118 107 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNU6-754P-201ENST00000391166 107 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 EIF4E2P1-201ENST00000393781 255 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNA5SP317-201ENST00000410176 116 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNA5SP311-201ENST00000411290 116 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD1O75127 EIF4HP2-201ENST00000424380 563 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AL353597.2-202ENST00000434901 373 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCD1O75127 RPS24P13-201ENST00000442520 397 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 snoU109.4-201ENST00000458953 143 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 Y_RNA.653-201ENST00000459091 95 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RPS27AP1-201ENST00000475545 471 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RN7SL432P-201ENST00000484057 298 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AC012123.2-201ENST00000485809 248 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCD1O75127 AC093815.1-201ENST00000508637 280 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms