Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM13O60858 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 PHKBP1-201ENST00000450951 1951 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 Y_RNA.60-201ENST00000362831 98 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 RNU6-1029P-201ENST00000384109 107 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 AL024474.1-201ENST00000404655 591 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 RNU6-101P-201ENST00000410323 104 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 RNU4-25P-201ENST00000410569 230 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 DPPA2P3-201ENST00000411853 655 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 RAC1P6-201ENST00000423911 575 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 COX6CP15-201ENST00000426313 211 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 OR1H1P-201ENST00000448731 937 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 RPS5P7-201ENST00000456664 608 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 RN7SL174P-201ENST00000475578 289 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 RN7SKP66-201ENST00000516681 231 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 AC090151.1-201ENST00000520784 730 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM13O60858 MIR5583-1-201ENST00000580941 59 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM13O60858 AL512782.1-201ENST00000603093 364 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 AC015967.1-201ENST00000619893 476 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM13O60858 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
TRIM13O60858 AC015813.6-201ENST00000624409 5808 ntBASIC4.57□□□□□ -1.68
TRIM13O60858 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM13O60858 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM13O60858 HSPA8P18-201ENST00000439846 1928 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TRIM13O60858 AL442639.1-201ENST00000625030 1899 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM13O60858 MTND5P7-201ENST00000413558 1798 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AL161781.1-201ENST00000354277 403 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RNU6-490P-201ENST00000362985 107 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 SNORA74A-201ENST00000364089 198 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RHOT1P2-201ENST00000366423 333 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM13O60858 AC016769.3-201ENST00000396562 315 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM13O60858 MED13P1-201ENST00000428342 171 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM13O60858 RPL7P28-201ENST00000437739 740 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM13O60858 AURKAPS2-201ENST00000454983 333 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 SNRPFP3-201ENST00000457792 225 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 SNORD127-201ENST00000458892 86 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM13O60858 RN7SL809P-201ENST00000482040 297 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM13O60858 TXNP6-201ENST00000510190 310 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 MTND1P19-201ENST00000511780 315 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC104057.1-201ENST00000515547 497 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RNU6-475P-201ENST00000516073 104 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RNU6-1023P-201ENST00000516137 106 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RNA5SP503-201ENST00000517047 117 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 RN7SKP147-201ENST00000517154 244 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC134698.5-201ENST00000519444 336 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM13O60858 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM13O60858 RN7SL176P-201ENST00000580352 264 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 MIR3910-1-201ENST00000580936 111 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 MIR3128-201ENST00000581957 66 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM13O60858 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM13O60858 AL021879.1-201ENST00000611756 288 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 AC010378.1-201ENST00000619270 362 ntBASIC4.56□□□□□ -1.68
TRIM13O60858 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TRIM13O60858 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM13O60858 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
TRIM13O60858 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM13O60858 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM13O60858 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM13O60858 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM13O60858 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM13O60858 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM13O60858 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM13O60858 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 RNU6-82P-201ENST00000363970 107 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 RNA5SP151-201ENST00000365632 117 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 Y_RNA.380-201ENST00000365663 111 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 EIF4E2P1-201ENST00000393781 255 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AL391417.1-201ENST00000404100 426 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AL391361.1-201ENST00000405580 489 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 AC069218.2-201ENST00000411665 344 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.55□□□□□ -1.68
TRIM13O60858 CHEK2P5-201ENST00000423877 246 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms