Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CYCSP1-201ENST00000604815 315 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GFRA3O60609 AL353748.2-201ENST00000622148 471 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 AF127577.6-201ENST00000623352 2191 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GFRA3O60609 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.61□□□□□ -1.51
GFRA3O60609 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
GFRA3O60609 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA3O60609 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 AL034546.1-201ENST00000623740 3693 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA3O60609 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 AC110597.1-201ENST00000562669 3176 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GFRA3O60609 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GFRA3O60609 RNA5SP388-201ENST00000362584 119 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 RNU6-142P-201ENST00000384019 107 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 Y_RNA.595-201ENST00000410403 105 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA3O60609 AC119751.6-201ENST00000416712 186 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 RPL36P19-201ENST00000430744 301 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 Z82188.1-201ENST00000436709 154 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 RPL10P17-201ENST00000453852 316 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 TOMM22P6-201ENST00000465035 409 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 RPL21P129-201ENST00000491732 478 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA3O60609 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA3O60609 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA3O60609 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.6□□□□□ -1.51
GFRA3O60609 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 AC012616.1-201ENST00000600294 197 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AC134878.1-201ENST00000619901 243 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AC110801.1-201ENST00000623590 212 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.6□□□□□ -1.51
GFRA3O60609 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GFRA3O60609 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 AL359195.2-201ENST00000623657 4412 ntBASIC5.6□□□□□ -1.51
GFRA3O60609 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.6□□□□□ -1.51
GFRA3O60609 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
GFRA3O60609 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 AC107980.1-201ENST00000558671 3355 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GFRA3O60609 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 RNU6-1272P-201ENST00000362776 107 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RNA5SP505-201ENST00000364748 108 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RNA5SP91-201ENST00000390902 119 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RNU6-754P-201ENST00000391166 107 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 U3.29-201ENST00000391296 212 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 SNORD12B-201ENST00000410433 91 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RNU6-554P-201ENST00000410466 106 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RPS3AP1-201ENST00000413190 320 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 COX6B1P1-201ENST00000415962 213 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 BTF3P11-201ENST00000426582 477 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC023141.8-201ENST00000442554 208 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 TDGF1P1-201ENST00000445734 527 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 AC092798.1-201ENST00000458542 409 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC068522.1-201ENST00000482895 345 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 AC004980.4-201ENST00000513375 203 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 SNORA70.11-201ENST00000515987 138 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 SNORA70.13-201ENST00000516116 138 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC009314.1-201ENST00000603871 304 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 AC091193.1-201ENST00000604640 448 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.59□□□□□ -1.51
GFRA3O60609 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.59□□□□□ -1.51
GFRA3O60609 AC091905.4-201ENST00000623432 202 ntBASIC5.59□□□□□ -1.51
GFRA3O60609 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
GFRA3O60609 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GFRA3O60609 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
GFRA3O60609 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms