Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MTND4LP22-201ENST00000508209 276 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 RN7SKP82-201ENST00000516786 223 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AL121821.2-201ENST00000556081 394 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AL133153.1-201ENST00000557756 303 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AP001486.3-201ENST00000615334 372 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AL603758.1-201ENST00000618654 241 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.3□□□□□ -1.56
GRIN3BO60391 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
GRIN3BO60391 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GRIN3BO60391 AP000542.2-201ENST00000623199 6179 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC066616.2-201ENST00000559334 1481 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GRIN3BO60391 AC067945.1-201ENST00000342609 618 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
GRIN3BO60391 Y_RNA.315-201ENST00000365117 102 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RNU6-38P-201ENST00000384085 107 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 Y_RNA.500-201ENST00000384466 111 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RNU11-4P-201ENST00000391149 133 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RNU2-39P-201ENST00000410604 198 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.29□□□□□ -1.56
GRIN3BO60391 HSPE1P1-201ENST00000421494 318 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.29□□□□□ -1.56
GRIN3BO60391 RPL36AP6-201ENST00000435770 321 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 CYCSP43-201ENST00000438233 310 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RNU6-333P-201ENST00000459117 107 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 Y_RNA.632-201ENST00000459189 102 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC096576.1-201ENST00000489014 359 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RPS15AP36-201ENST00000492022 382 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC004062.1-201ENST00000509926 645 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.29□□□□□ -1.56
GRIN3BO60391 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.29□□□□□ -1.56
GRIN3BO60391 RNU6-27P-201ENST00000516146 107 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 RNA5SP73-201ENST00000516744 108 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.29□□□□□ -1.56
GRIN3BO60391 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.29□□□□□ -1.56
GRIN3BO60391 AC128657.1-201ENST00000549459 145 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.29□□□□□ -1.56
GRIN3BO60391 SETP7-201ENST00000552169 453 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC008638.3-201ENST00000603341 463 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.29□□□□□ -1.56
GRIN3BO60391 AC040168.1-201ENST00000623594 991 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 AC091925.2-201ENST00000625059 256 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
GRIN3BO60391 AL672167.1-205ENST00000641112 3080 ntBASIC5.29□□□□□ -1.56
GRIN3BO60391 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.29□□□□□ -1.56
GRIN3BO60391 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.28□□□□□ -1.56
GRIN3BO60391 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.28□□□□□ -1.56
GRIN3BO60391 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.28□□□□□ -1.56
GRIN3BO60391 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.28□□□□□ -1.56
GRIN3BO60391 RNA5SP175-201ENST00000364275 119 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 U3.12-201ENST00000364498 214 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 Y_RNA.387-201ENST00000383918 102 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 SNORA5A-201ENST00000384111 134 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GRIN3BO60391 CTSL3P-202ENST00000412179 788 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 ARL5AP1-201ENST00000418991 388 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AP000907.1-201ENST00000428428 510 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC236972.1-201ENST00000433225 199 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 RPS17P13-201ENST00000448974 407 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 BX276092.4-201ENST00000452056 248 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.28□□□□□ -1.56
GRIN3BO60391 snoU109.4-201ENST00000458953 143 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC087385.1-201ENST00000475062 312 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 FAM206BP-201ENST00000510179 541 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 MTCO3P44-201ENST00000510977 541 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC017037.2-201ENST00000513850 890 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 RN7SKP13-201ENST00000515933 244 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 Y_RNA.665-201ENST00000516177 98 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.28□□□□□ -1.56
GRIN3BO60391 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.28□□□□□ -1.56
GRIN3BO60391 NCAPGP2-201ENST00000557911 754 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 MIR4424-201ENST00000585257 86 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AL355812.1-201ENST00000603215 216 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AL451044.1-201ENST00000604867 238 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC113194.1-201ENST00000606037 500 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC116312.1-201ENST00000606841 314 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AL031666.3-201ENST00000609320 1006 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 AC008121.3-201ENST00000618726 433 ntBASIC5.28□□□□□ -1.56
GRIN3BO60391 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.28□□□□□ -1.56
GRIN3BO60391 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GRIN3BO60391 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
GRIN3BO60391 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.27□□□□□ -1.57
GRIN3BO60391 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms