Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHD1O14646 AC006026.1-201ENST00000444025 1803 ntBASIC2.5□□□□□ -2.01
CHD1O14646 Y_RNA.205-201ENST00000364128 113 ntBASIC2.5□□□□□ -2.01
CHD1O14646 AL023807.1-201ENST00000407932 359 ntBASIC2.5□□□□□ -2.01
CHD1O14646 RPL23AP47-201ENST00000408017 460 ntBASIC2.5□□□□□ -2.01
CHD1O14646 RPL17P12-201ENST00000413391 526 ntBASIC2.5□□□□□ -2.01
CHD1O14646 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHD1O14646 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.5□□□□□ -2.01
CHD1O14646 COX6CP14-201ENST00000469580 174 ntBASIC2.5□□□□□ -2.01
CHD1O14646 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHD1O14646 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
CHD1O14646 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
CHD1O14646 MIR6788-201ENST00000618842 66 ntBASIC2.5□□□□□ -2.01
CHD1O14646 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.5□□□□□ -2.01
CHD1O14646 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
CHD1O14646 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.5□□□□□ -2.01
CHD1O14646 RNA5SP138-201ENST00000365098 114 ntBASIC2.49□□□□□ -2.01
CHD1O14646 AL109741.2-201ENST00000455561 343 ntBASIC2.49□□□□□ -2.01
CHD1O14646 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHD1O14646 RN7SKP5-201ENST00000517045 272 ntBASIC2.49□□□□□ -2.01
CHD1O14646 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
CHD1O14646 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.49□□□□□ -2.01
CHD1O14646 AL049838.1-201ENST00000563647 981 ntBASIC2.49□□□□□ -2.01
CHD1O14646 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHD1O14646 MIR517C-201ENST00000385103 95 ntBASIC2.48□□□□□ -2.01
CHD1O14646 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
CHD1O14646 HSPE1P1-201ENST00000421494 318 ntBASIC2.48□□□□□ -2.01
CHD1O14646 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.48□□□□□ -2.01
CHD1O14646 AC008885.2-201ENST00000509506 930 ntBASIC2.48□□□□□ -2.01
CHD1O14646 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.48□□□□□ -2.01
CHD1O14646 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.48□□□□□ -2.01
CHD1O14646 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CHD1O14646 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.48□□□□□ -2.01
CHD1O14646 SNORA67.6-201ENST00000391093 99 ntBASIC2.48□□□□□ -2.01
CHD1O14646 AC240504.1-201ENST00000395709 845 ntBASIC2.48□□□□□ -2.01
CHD1O14646 ERHP2-201ENST00000402323 299 ntBASIC2.48□□□□□ -2.01
CHD1O14646 AC092638.1-201ENST00000411966 1275 ntBASIC2.48□□□□□ -2.01
CHD1O14646 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHD1O14646 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.48□□□□□ -2.01
CHD1O14646 RPS15AP7-201ENST00000439294 405 ntBASIC2.48□□□□□ -2.01
CHD1O14646 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.48□□□□□ -2.01
CHD1O14646 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.48□□□□□ -2.01
CHD1O14646 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.48□□□□□ -2.01
CHD1O14646 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.48□□□□□ -2.01
CHD1O14646 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.48□□□□□ -2.01
CHD1O14646 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.48□□□□□ -2.01
CHD1O14646 AC104307.1-201ENST00000616142 196 ntBASIC2.48□□□□□ -2.01
CHD1O14646 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
CHD1O14646 USP9YP27-201ENST00000418455 438 ntBASIC2.47□□□□□ -2.01
CHD1O14646 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.47□□□□□ -2.01
CHD1O14646 MTND4LP16-201ENST00000440828 295 ntBASIC2.47□□□□□ -2.01
CHD1O14646 MTND3P6-201ENST00000485242 339 ntBASIC2.47□□□□□ -2.01
CHD1O14646 AC005912.1-201ENST00000495392 255 ntBASIC2.47□□□□□ -2.01
CHD1O14646 RPL21P131-201ENST00000497298 483 ntBASIC2.47□□□□□ -2.01
CHD1O14646 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHD1O14646 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.47□□□□□ -2.01
CHD1O14646 MIR4285-201ENST00000581001 85 ntBASIC2.47□□□□□ -2.01
CHD1O14646 AC083806.3-201ENST00000614016 455 ntBASIC2.47□□□□□ -2.01
CHD1O14646 AC025048.6-202ENST00000627667 438 ntBASIC2.47□□□□□ -2.01
CHD1O14646 RPL31P2-201ENST00000413849 377 ntBASIC2.46□□□□□ -2.02
CHD1O14646 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.46□□□□□ -2.02
CHD1O14646 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.46□□□□□ -2.02
CHD1O14646 AC022634.1-201ENST00000520765 532 ntBASIC2.46□□□□□ -2.02
CHD1O14646 AC084851.1-201ENST00000529105 249 ntBASIC2.46□□□□□ -2.02
CHD1O14646 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.46□□□□□ -2.02
CHD1O14646 AC002487.1-201ENST00000604565 994 ntBASIC2.46□□□□□ -2.02
CHD1O14646 AC006249.1-201ENST00000621223 471 ntBASIC2.46□□□□□ -2.02
CHD1O14646 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHD1O14646 CKAP2P1-201ENST00000555477 2049 ntBASIC2.46□□□□□ -2.02
CHD1O14646 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CHD1O14646 SYF2P1-201ENST00000550658 413 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AC012321.1-201ENST00000561622 1588 ntBASIC2.45□□□□□ -2.02
CHD1O14646 RNA5SP393-201ENST00000363423 117 ntBASIC2.45□□□□□ -2.02
CHD1O14646 SNORD56.5-201ENST00000364281 72 ntBASIC2.45□□□□□ -2.02
CHD1O14646 MIR548J-201ENST00000408833 112 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AL513185.2-201ENST00000425543 193 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHD1O14646 OR51B8P-201ENST00000449892 769 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.45□□□□□ -2.02
CHD1O14646 AC078918.1-201ENST00000498515 228 ntBASIC2.45□□□□□ -2.02
CHD1O14646 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.45□□□□□ -2.02
CHD1O14646 PRELID2P1-201ENST00000552837 301 ntBASIC2.45□□□□□ -2.02
CHD1O14646 MTCO3P24-201ENST00000572729 782 ntBASIC2.45□□□□□ -2.02
CHD1O14646 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.45□□□□□ -2.02
CHD1O14646 MIR6078-201ENST00000611069 100 ntBASIC2.45□□□□□ -2.02
CHD1O14646 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.45□□□□□ -2.02
CHD1O14646 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHD1O14646 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHD1O14646 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHD1O14646 RNU4-41P-201ENST00000364426 143 ntBASIC2.44□□□□□ -2.02
CHD1O14646 RNA5SP37-201ENST00000365420 130 ntBASIC2.44□□□□□ -2.02
CHD1O14646 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHD1O14646 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHD1O14646 AL354695.1-201ENST00000427935 228 ntBASIC2.44□□□□□ -2.02
CHD1O14646 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CHD1O14646 TPT1P14-201ENST00000448018 505 ntBASIC2.44□□□□□ -2.02
CHD1O14646 AC010683.1-201ENST00000473673 378 ntBASIC2.44□□□□□ -2.02
CHD1O14646 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.44□□□□□ -2.02
CHD1O14646 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms