Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
SOX1O00570 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 AC074029.4-201ENST00000624796 1859 ntBASIC5.2□□□□□ -1.58
SOX1O00570 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 RHOT1P2-201ENST00000366423 333 ntBASIC5.2□□□□□ -1.58
SOX1O00570 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SOX1O00570 RNU6-95P-201ENST00000384697 107 ntBASIC5.2□□□□□ -1.58
SOX1O00570 RNU4-65P-201ENST00000410473 140 ntBASIC5.2□□□□□ -1.58
SOX1O00570 RNU2-23P-201ENST00000410545 195 ntBASIC5.2□□□□□ -1.58
SOX1O00570 RNA5SP111-201ENST00000411386 101 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AL356968.1-201ENST00000416622 474 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.2□□□□□ -1.58
SOX1O00570 AL356387.2-201ENST00000422272 243 ntBASIC5.2□□□□□ -1.58
SOX1O00570 GOT2P5-201ENST00000433995 546 ntBASIC5.2□□□□□ -1.58
SOX1O00570 CEACAMP1-201ENST00000434624 1035 ntBASIC5.2□□□□□ -1.58
SOX1O00570 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.2□□□□□ -1.58
SOX1O00570 AC010655.1-201ENST00000449336 292 ntBASIC5.2□□□□□ -1.58
SOX1O00570 FABP5P13-201ENST00000452144 328 ntBASIC5.2□□□□□ -1.58
SOX1O00570 PCNPP5-201ENST00000452246 481 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 AC079168.2-201ENST00000453977 416 ntBASIC5.2□□□□□ -1.58
SOX1O00570 RPL21P126-201ENST00000470049 478 ntBASIC5.2□□□□□ -1.58
SOX1O00570 RPL7P49-201ENST00000471402 708 ntBASIC5.2□□□□□ -1.58
SOX1O00570 MTCO3P44-201ENST00000510977 541 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 AC015795.1-201ENST00000513669 327 ntBASIC5.2□□□□□ -1.58
SOX1O00570 SCARNA16.2-201ENST00000516520 172 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC022726.1-201ENST00000587475 207 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 AL355812.1-201ENST00000603215 216 ntBASIC5.2□□□□□ -1.58
SOX1O00570 AC007998.5-201ENST00000622938 237 ntBASIC5.2□□□□□ -1.58
SOX1O00570 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SOX1O00570 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 AC009229.4-201ENST00000623854 1947 ntBASIC5.2□□□□□ -1.58
SOX1O00570 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
SOX1O00570 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SOX1O00570 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SOX1O00570 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SOX1O00570 SALL4P2-201ENST00000423288 2910 ntBASIC5.2□□□□□ -1.58
SOX1O00570 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX1O00570 AC083837.1-201ENST00000565297 2994 ntBASIC5.19□□□□□ -1.58
SOX1O00570 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX1O00570 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX1O00570 STX3-208ENST00000641815 3236 ntBASIC5.19□□□□□ -1.58
SOX1O00570 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SOX1O00570 Y_RNA.2-201ENST00000362330 96 ntBASIC5.19□□□□□ -1.58
SOX1O00570 SNORA2.3-201ENST00000383920 135 ntBASIC5.19□□□□□ -1.58
SOX1O00570 Y_RNA.424-201ENST00000384063 103 ntBASIC5.19□□□□□ -1.58
SOX1O00570 Y_RNA.552-201ENST00000384665 112 ntBASIC5.19□□□□□ -1.58
SOX1O00570 MIR589-201ENST00000385238 99 ntBASIC5.19□□□□□ -1.58
SOX1O00570 RPL23AP26-201ENST00000412728 464 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC011933.1-201ENST00000413334 321 ntBASIC5.19□□□□□ -1.58
SOX1O00570 RPS15AP40-201ENST00000419621 391 ntBASIC5.19□□□□□ -1.58
SOX1O00570 RPL21P109-201ENST00000422213 475 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX1O00570 MRPS18BP2-201ENST00000434310 759 ntBASIC5.19□□□□□ -1.58
SOX1O00570 SUMO1P3-201ENST00000439961 304 ntBASIC5.19□□□□□ -1.58
SOX1O00570 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX1O00570 snoU109.4-201ENST00000458953 143 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC117503.1-201ENST00000472241 394 ntBASIC5.19□□□□□ -1.58
SOX1O00570 DEFB109F-201ENST00000491870 277 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX1O00570 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.19□□□□□ -1.58
SOX1O00570 AC096745.1-201ENST00000509945 370 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX1O00570 AC098976.1-201ENST00000513014 541 ntBASIC5.19□□□□□ -1.58
SOX1O00570 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 AC022616.4-201ENST00000522985 181 ntBASIC5.19□□□□□ -1.58
SOX1O00570 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.19□□□□□ -1.58
SOX1O00570 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SOX1O00570 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX1O00570 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX1O00570 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX1O00570 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.19□□□□□ -1.58
SOX1O00570 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SOX1O00570 AC011494.1-201ENST00000596454 237 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC174048.1-201ENST00000603389 144 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC011626.1-201ENST00000604710 562 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX1O00570 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.19□□□□□ -1.58
SOX1O00570 AL021879.1-201ENST00000611756 288 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC243312.2-201ENST00000623340 601 ntBASIC5.19□□□□□ -1.58
SOX1O00570 AC110801.1-201ENST00000623590 212 ntBASIC5.19□□□□□ -1.58
SOX1O00570 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms