Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXN3O00409 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 AC012443.1-201ENST00000605605 231 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC093838.1-201ENST00000613014 469 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 uc_338.12-201ENST00000616344 181 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL360181.4-201ENST00000621752 134 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 U6.98-201ENST00000637157 84 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC099654.12-201ENST00000639868 649 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
FOXN3O00409 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN3O00409 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN3O00409 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN3O00409 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.15□□□□□ -1.74
FOXN3O00409 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.15□□□□□ -1.74
FOXN3O00409 AC092326.2-201ENST00000624772 1561 ntBASIC4.15□□□□□ -1.74
FOXN3O00409 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FOXN3O00409 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FOXN3O00409 TAB3P1-202ENST00000452645 1634 ntBASIC4.15□□□□□ -1.74
FOXN3O00409 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
FOXN3O00409 MIR372-201ENST00000362225 67 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 RN7SKP226-201ENST00000364912 300 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 RNU6-1283P-201ENST00000365314 105 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN3O00409 RNU1-39P-201ENST00000383897 165 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 RNU6-754P-201ENST00000391166 107 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN3O00409 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC008481.1-201ENST00000463278 396 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC110792.1-201ENST00000491826 472 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXN3O00409 BTF3L4P4-201ENST00000506381 449 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC136619.2-201ENST00000563361 631 ntBASIC4.15□□□□□ -1.75
FOXN3O00409 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXN3O00409 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN3O00409 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN3O00409 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXN3O00409 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 OTUD4P1-201ENST00000237841 3067 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 RNU4-1-201ENST00000363925 141 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 RNU1-13P-201ENST00000384499 162 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 MIR199A2-201ENST00000385289 110 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 RPL7P60-201ENST00000397636 735 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN3O00409 CRYBB2P1-203ENST00000415709 538 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXN3O00409 DUTP6-201ENST00000425573 462 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 VDAC1P3-201ENST00000434069 851 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AF228730.2-201ENST00000438784 848 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AC114755.5-201ENST00000447760 831 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN3O00409 MTND1P12-201ENST00000455231 147 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 RPL21P11-201ENST00000461458 483 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AC105252.1-201ENST00000503089 286 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 GMPSP1-201ENST00000514075 579 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN3O00409 RNU6-718P-201ENST00000516166 105 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN3O00409 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN3O00409 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN3O00409 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN3O00409 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN3O00409 AL136363.1-201ENST00000605349 337 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 HMGB1P50-201ENST00000605814 607 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 AL158209.2-201ENST00000619266 216 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 RNA5SP196-201ENST00000625967 102 ntBASIC4.14□□□□□ -1.75
FOXN3O00409 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN3O00409 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
FOXN3O00409 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXN3O00409 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FOXN3O00409 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXN3O00409 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN3O00409 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN3O00409 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXN3O00409 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN3O00409 RNU6-76P-201ENST00000384060 104 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 HLFP1-201ENST00000402375 499 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 AC007390.1-201ENST00000415722 356 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN3O00409 PPP1R11P2-201ENST00000423543 382 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
FOXN3O00409 RSL24D1P6-201ENST00000426934 401 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 AL117339.2-201ENST00000430475 180 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 DNAJC19P4-201ENST00000440115 345 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 AC093156.1-201ENST00000440382 670 ntBASIC4.13□□□□□ -1.75
FOXN3O00409 RPL26P6-201ENST00000440913 438 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms