Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 MIR331-201ENST00000362302 94 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RNU6-335P-201ENST00000364563 113 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RNU4-66P-201ENST00000365199 138 ntBASIC4.5□□□□□ -1.69
CBX4O00257 SNORD115-7-201ENST00000365306 82 ntBASIC4.5□□□□□ -1.69
CBX4O00257 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 RNU6-946P-201ENST00000383878 107 ntBASIC4.5□□□□□ -1.69
CBX4O00257 SNORA48.7-201ENST00000391302 135 ntBASIC4.5□□□□□ -1.69
CBX4O00257 HSPD1P16-201ENST00000402302 394 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.5□□□□□ -1.69
CBX4O00257 RPL35AP12-201ENST00000425362 338 ntBASIC4.5□□□□□ -1.69
CBX4O00257 DUTP6-201ENST00000425573 462 ntBASIC4.5□□□□□ -1.69
CBX4O00257 CALM2P2-201ENST00000428512 440 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RPS29P17-201ENST00000430795 166 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AL359073.1-201ENST00000448036 403 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RN7SL98P-201ENST00000462271 300 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RPL23AP2-201ENST00000471227 466 ntBASIC4.5□□□□□ -1.69
CBX4O00257 RPL21P99-201ENST00000480369 423 ntBASIC4.5□□□□□ -1.69
CBX4O00257 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.5□□□□□ -1.69
CBX4O00257 AC091167.1-201ENST00000492017 396 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AC108022.1-201ENST00000493466 478 ntBASIC4.5□□□□□ -1.69
CBX4O00257 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.5□□□□□ -1.69
CBX4O00257 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.5□□□□□ -1.69
CBX4O00257 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.5□□□□□ -1.69
CBX4O00257 AC104806.1-201ENST00000508720 308 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.5□□□□□ -1.69
CBX4O00257 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CBX4O00257 RANP3-201ENST00000530970 276 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AC023050.3-201ENST00000541142 333 ntBASIC4.5□□□□□ -1.69
CBX4O00257 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.5□□□□□ -1.69
CBX4O00257 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.5□□□□□ -1.69
CBX4O00257 AC012182.1-201ENST00000570133 895 ntBASIC4.5□□□□□ -1.69
CBX4O00257 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.5□□□□□ -1.69
CBX4O00257 AL117336.2-201ENST00000602435 335 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AC079587.1-201ENST00000603846 277 ntBASIC4.5□□□□□ -1.69
CBX4O00257 AL160290.3-201ENST00000604869 165 ntBASIC4.5□□□□□ -1.69
CBX4O00257 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 AC007998.5-201ENST00000622938 237 ntBASIC4.5□□□□□ -1.69
CBX4O00257 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.5□□□□□ -1.69
CBX4O00257 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CBX4O00257 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CBX4O00257 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 AC092435.4-201ENST00000623012 4159 ntBASIC4.49□□□□□ -1.69
CBX4O00257 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 Y_RNA.576-201ENST00000384781 102 ntBASIC4.49□□□□□ -1.69
CBX4O00257 SOD2P1-201ENST00000396543 562 ntBASIC4.49□□□□□ -1.69
CBX4O00257 RNU4-26P-201ENST00000410270 107 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC011933.1-201ENST00000413334 321 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AL139095.3-201ENST00000419672 1203 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC024082.2-201ENST00000434771 238 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.49□□□□□ -1.69
CBX4O00257 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.49□□□□□ -1.69
CBX4O00257 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.49□□□□□ -1.69
CBX4O00257 AL118520.1-201ENST00000450770 291 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX4O00257 AC116533.1-201ENST00000459748 321 ntBASIC4.49□□□□□ -1.69
CBX4O00257 HMGN2P26-201ENST00000463169 339 ntBASIC4.49□□□□□ -1.69
CBX4O00257 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX4O00257 RN7SL303P-201ENST00000469773 251 ntBASIC4.49□□□□□ -1.69
CBX4O00257 RN7SL812P-201ENST00000493791 279 ntBASIC4.49□□□□□ -1.69
CBX4O00257 MLLT10P2-201ENST00000506434 249 ntBASIC4.49□□□□□ -1.69
CBX4O00257 KLHL2P1-201ENST00000508691 521 ntBASIC4.49□□□□□ -1.69
CBX4O00257 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.49□□□□□ -1.69
CBX4O00257 GMPSP1-201ENST00000514075 579 ntBASIC4.49□□□□□ -1.69
CBX4O00257 SNORA31.20-201ENST00000517111 133 ntBASIC4.49□□□□□ -1.69
CBX4O00257 MRPL49P2-201ENST00000521066 465 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC008489.1-201ENST00000524271 483 ntBASIC4.49□□□□□ -1.69
CBX4O00257 PSMA2P1-201ENST00000526365 646 ntBASIC4.49□□□□□ -1.69
CBX4O00257 SNRPGP15-201ENST00000600149 222 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC113403.1-201ENST00000604910 193 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC010133.1-201ENST00000615809 842 ntBASIC4.49□□□□□ -1.69
CBX4O00257 uc_338.13-201ENST00000618243 179 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AL445567.2-201ENST00000618935 498 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC005086.4-201ENST00000623065 213 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC007546.2-201ENST00000623996 360 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AC090617.10-201ENST00000624308 134 ntBASIC4.49□□□□□ -1.69
CBX4O00257 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.49□□□□□ -1.69
CBX4O00257 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 OR51H2P-202ENST00000641424 3046 ntBASIC4.49□□□□□ -1.69
CBX4O00257 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.49□□□□□ -1.69
CBX4O00257 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CBX4O00257 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 Y_RNA.166-201ENST00000363730 102 ntBASIC4.48□□□□□ -1.69
CBX4O00257 Y_RNA.356-201ENST00000365475 113 ntBASIC4.48□□□□□ -1.69
CBX4O00257 SMIM11P1-201ENST00000369586 178 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms