Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 SEM1P1-201ENST00000506694 209 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 MTCO1P47-201ENST00000523889 1271 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 NOP56P3-201ENST00000549457 385 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 CBX3P2-202ENST00000583365 535 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC135178.6-201ENST00000605314 398 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 AC095031.1-201ENST00000623685 672 ntBASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.16□□□□□ -2.06
SCN10AQ9Y5Y9 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 UBE2V1P9-201ENST00000414760 368 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 LINC01347-201ENST00000417964 355 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 MTCO1P57-201ENST00000432182 261 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 LSM1P1-201ENST00000438629 273 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 RPL23AP20-201ENST00000447965 421 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AP002345.1-201ENST00000456493 928 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AL031183.1-201ENST00000457667 207 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 RBM43P1-201ENST00000476891 1081 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 FAM92A1P1-201ENST00000528023 890 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 XIAPP1-201ENST00000603162 600 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AL360181.4-201ENST00000621752 134 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AP000676.4-201ENST00000624659 623 ntBASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SCN10AQ9Y5Y9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RPL23AP39-201ENST00000415533 405 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RPL21P131-201ENST00000497298 483 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AP001804.3-201ENST00000525146 880 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC126177.3-201ENST00000551839 688 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC018618.2-201ENST00000604770 446 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC128687.1-201ENST00000605304 619 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 MTND5P31-201ENST00000419366 1374 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNU6-730P-201ENST00000383954 104 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNU6-152P-201ENST00000384037 107 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNU6-1226P-201ENST00000384317 107 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNU6-821P-201ENST00000390995 107 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 TMEM167AP1-201ENST00000423409 219 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RPL7P54-201ENST00000438336 674 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC009237.8-201ENST00000445492 379 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RPS29P11-201ENST00000496507 171 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 MLLT10P2-201ENST00000506434 249 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC008739.2-201ENST00000597006 317 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC068790.3-201ENST00000602988 553 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 DUXAP3-201ENST00000603616 594 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 AC010738.1-201ENST00000604970 987 ntBASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SCN10AQ9Y5Y9 RNU1-109P-201ENST00000383960 147 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC073264.1-201ENST00000411508 416 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC009414.1-201ENST00000427200 443 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 UBE2V1P6-201ENST00000430840 422 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AP000852.1-201ENST00000472460 573 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AIG1P1-201ENST00000503376 148 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC098799.2-201ENST00000509466 868 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 HMGB1P1-201ENST00000522557 636 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 MED28P6-201ENST00000558776 231 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC008687.2-201ENST00000597865 520 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC091057.2-201ENST00000602594 792 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AL137246.1-201ENST00000607072 977 ntBASIC2.13□□□□□ -2.07
SCN10AQ9Y5Y9 AC004775.1-201ENST00000607389 753 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms