Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AP001350.1-201ENST00000601906 1524 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC068647.1-201ENST00000489539 2265 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 RN7SKP285-201ENST00000410137 318 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 RNU2-71P-201ENST00000411395 189 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL590233.1-201ENST00000430017 456 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC127537.2-201ENST00000439258 465 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 HSPE1P28-201ENST00000443139 211 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AP000542.1-201ENST00000448473 371 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 MTND1P27-201ENST00000451117 902 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 snoU13.3-201ENST00000459441 104 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 RPL7P49-201ENST00000471402 708 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 RPL23AP55-201ENST00000498163 452 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 RPL37P25-201ENST00000507308 276 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AF131216.2-201ENST00000512316 564 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AP003385.6-201ENST00000531603 374 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC012182.1-201ENST00000570133 895 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 MIR5186-201ENST00000577504 120 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL353997.4-201ENST00000586196 166 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 NDUFA8P1-201ENST00000605525 367 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL159169.3-201ENST00000608871 561 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AC084757.4-201ENST00000616350 526 ntBASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX9Q9Y5X1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
SNX9Q9Y5X1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC097714.1-201ENST00000511272 1647 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 SNORA63.1-201ENST00000362493 131 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AIMP1P1-201ENST00000418670 937 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MTCO2P5-201ENST00000422621 426 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC010975.2-201ENST00000427781 588 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 EZH2P1-201ENST00000431167 291 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 VDAC1P3-201ENST00000434069 851 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 PGBD4P3-201ENST00000440731 581 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 RPL7P36-201ENST00000444633 681 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MTCO3P44-201ENST00000510977 541 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MTND1P5-201ENST00000517906 940 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AP006245.1-201ENST00000522549 120 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC138749.5-201ENST00000611461 208 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC013476.2-201ENST00000614456 459 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AL355365.1-201ENST00000616480 294 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 AC116165.2-201ENST00000616705 206 ntBASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX9Q9Y5X1 CCT4P2-201ENST00000233836 1548 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms