Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AP004371.1-201ENST00000525240 214 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AP000857.1-201ENST00000532151 543 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC018630.1-201ENST00000541376 925 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 ZNF519P2-201ENST00000557032 169 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 HSPE1P5-201ENST00000561489 272 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL845331.3-202ENST00000562856 261 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 BRDTP1-201ENST00000605735 677 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC007684.1-201ENST00000609671 477 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC245517.5-201ENST00000611529 162 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 U4.5-201ENST00000617137 123 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL160394.1-201ENST00000624765 724 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 LRRC77P-213ENST00000637727 880 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.81
PKP3Q9Y446 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.81
PKP3Q9Y446 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNA5SP479-201ENST00000364858 117 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNY3P13-201ENST00000365542 102 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 SNORA20.2-201ENST00000383922 131 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 SNORD3H-201ENST00000384486 214 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 MIR135A2-201ENST00000384854 100 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNU6-278P-201ENST00000390945 109 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RPL32P23-201ENST00000397237 405 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RPL7P60-201ENST00000397636 735 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNU2-62P-201ENST00000410868 191 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 MTCO3P12-201ENST00000416718 547 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 ELOCP4-201ENST00000420090 333 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL139247.1-201ENST00000422768 325 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC137499.1-201ENST00000427602 88 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 FCF1P1-201ENST00000432690 571 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 SNORA71B-202ENST00000439232 272 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC093156.1-201ENST00000440382 670 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 PSPHP1-201ENST00000450062 261 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RPS3AP50-201ENST00000487064 803 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC002456.2-201ENST00000509356 380 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC021146.1-201ENST00000511202 716 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNA5SP208-201ENST00000516156 78 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNU6-314P-201ENST00000516574 104 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNA5SP337-201ENST00000517007 109 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 MTND4LP26-201ENST00000518144 282 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL133153.1-201ENST00000557756 303 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 TPRKBP2-201ENST00000565969 475 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 SNORD84-203ENST00000584275 78 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL049634.3-201ENST00000604968 457 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AP000860.1-201ENST00000605250 559 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 SNORA62.6-201ENST00000606322 83 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 CR381653.2-201ENST00000624041 768 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC124864.2-201ENST00000624736 186 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AL645937.1-201ENST00000641739 1652 ntBASIC3.77□□□□□ -1.81
PKP3Q9Y446 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
PKP3Q9Y446 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PKP3Q9Y446 AC006504.1-201ENST00000562493 3666 ntBASIC3.76□□□□□ -1.81
PKP3Q9Y446 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKP3Q9Y446 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms