Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 BNIP3P8-201ENST00000597863 560 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 SEPT7P9-203ENST00000604116 343 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC091925.2-201ENST00000625059 256 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AP001148.1-201ENST00000624124 2359 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 RNU6-744P-201ENST00000365557 107 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 RNU6-1316P-201ENST00000384242 108 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AP000567.1-201ENST00000406413 156 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 USP9YP13-201ENST00000417797 480 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC005300.1-201ENST00000428401 373 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 RPL7P36-201ENST00000444633 681 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 GDI2P2-201ENST00000445131 608 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AP000542.1-201ENST00000448473 371 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC115115.1-201ENST00000449927 248 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AP001992.1-205ENST00000462248 379 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC112204.1-201ENST00000502591 103 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 RNA5SP468-201ENST00000516782 93 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC024224.1-201ENST00000538284 609 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 SYF2P1-201ENST00000550658 413 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 ZNF519P3-201ENST00000557158 1032 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 MIR5697-201ENST00000578045 78 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 BCRP9-201ENST00000605312 388 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 AL360181.4-201ENST00000621752 134 ntBASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDK11AQ9UQ88 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CDK11AQ9UQ88 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 RNU4-35P-201ENST00000362588 141 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 RNU6-533P-201ENST00000384144 107 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 RNU6-809P-201ENST00000384461 107 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 U3.19-201ENST00000390893 196 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 SNORA40.3-201ENST00000390964 122 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 RNA5SP129-201ENST00000410276 118 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC096664.2-201ENST00000411843 406 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AL590365.1-201ENST00000450788 243 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 MTCYBP1-201ENST00000454315 1119 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 snoU13.8-201ENST00000458890 104 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC093677.1-201ENST00000514414 678 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AP002748.2-201ENST00000528671 348 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC022878.1-201ENST00000530684 149 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC022880.1-201ENST00000534017 973 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 NDUFA8P1-201ENST00000605525 367 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC091965.4-201ENST00000607691 587 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC099842.1-201ENST00000619919 596 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AP003355.3-201ENST00000623465 114 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 AC092447.10-201ENST00000620607 1652 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.58□□□□□ -1.52
CDK11AQ9UQ88 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RNU6-343P-201ENST00000364709 104 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RNU6-328P-201ENST00000390887 106 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 MTHFD2P2-201ENST00000407725 247 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RPS3AP44-201ENST00000425466 790 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 USP9YP14-201ENST00000430663 563 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms