Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC009643.1-201ENST00000532030 391 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC018630.1-201ENST00000541376 925 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 RPL23AP84-201ENST00000571193 464 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC138761.3-201ENST00000579993 334 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC006116.10-201ENST00000591836 581 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AC008737.2-201ENST00000599446 118 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AL391358.1-201ENST00000605342 190 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AL589994.2-201ENST00000621124 579 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 AL445363.3-201ENST00000623080 671 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ASNSP1-201ENST00000518311 1939 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 MTND5P10-201ENST00000603719 1809 ntBASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDC42EP3Q9UKI2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AP001273.1-201ENST00000624493 3152 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 Y_RNA.28-201ENST00000362554 111 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 Y_RNA.144-201ENST00000363521 113 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 SNORA23-201ENST00000365128 182 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-701P-201ENST00000384059 107 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-639P-201ENST00000384074 107 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 SNORD70.1-201ENST00000391007 85 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MIR450B-201ENST00000401182 78 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 NDUFS5P1-201ENST00000405668 289 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-1304P-201ENST00000411374 106 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC099677.1-201ENST00000420575 175 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 PPP1R11P2-201ENST00000423543 382 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 CYCSP43-201ENST00000438233 310 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC073587.1-201ENST00000447093 876 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AL162388.1-201ENST00000450912 352 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MRPS31P2-201ENST00000451581 518 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 Y_RNA.653-201ENST00000459091 95 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU7-167P-201ENST00000459160 62 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC058823.1-201ENST00000485315 474 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 IGLV2-34-201ENST00000490007 283 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC026979.1-201ENST00000492525 396 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC008526.1-201ENST00000509149 338 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 SMURF2P1-201ENST00000514992 481 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-123P-201ENST00000516163 102 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-1069P-201ENST00000516612 133 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 SCARNA20.4-201ENST00000516969 131 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 RANP9-201ENST00000519957 271 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AL450472.3-201ENST00000615578 367 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AL591926.8-201ENST00000616876 211 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 MTND5P16-201ENST00000460269 1703 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 OR51H2P-202ENST00000641424 3046 ntBASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDC42EP3Q9UKI2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms