Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HIGD1AP2-201ENST00000446367 280 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 MTND2P19-201ENST00000449129 1012 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC233982.1-201ENST00000451247 436 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 PNPLA4P1-201ENST00000458328 305 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 SETP6-201ENST00000479329 568 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 SUMO1P1-201ENST00000497904 306 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 SNORA70.16-201ENST00000516390 95 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 SNRPGP18-201ENST00000553000 214 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 HMGB1P14-201ENST00000557424 591 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC090888.1-201ENST00000561335 1141 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AGGF1P5-201ENST00000567900 919 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC090312.2-201ENST00000582687 378 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC107214.2-201ENST00000608204 634 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 CR589904.2-201ENST00000612533 440 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC090116.1-201ENST00000615679 446 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AL353748.2-201ENST00000622148 471 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AL356266.1-201ENST00000623311 483 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC006020.1-201ENST00000420179 1854 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AL022578.1-201ENST00000439330 1433 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
COMMD3Q9UBI1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 FTLP6-201ENST00000355274 422 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 RNA5SP289-201ENST00000362332 137 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 SNORA3A-201ENST00000364113 130 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 XGY1-201ENST00000381172 446 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AL023807.1-201ENST00000407932 359 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC006946.1-201ENST00000429106 328 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AL136380.1-201ENST00000447970 162 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC006499.2-201ENST00000513470 337 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 RNA5SP356-201ENST00000515972 94 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 BTF3P12-201ENST00000519620 469 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC011260.1-201ENST00000578420 472 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 DNAJC19P3-201ENST00000594491 331 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC025588.3-201ENST00000604182 274 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC005000.2-201ENST00000605468 310 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC004852.3-201ENST00000614131 326 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 MIR6873-201ENST00000622788 63 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC025034.2-201ENST00000623264 286 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AP006248.3-201ENST00000623580 594 ntBASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.65□□□□□ -2.15
COMMD3Q9UBI1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SNORA38-201ENST00000363946 132 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SNORA16B-201ENST00000364674 135 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SNORA70.4-201ENST00000365509 134 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SNORA51.12-201ENST00000384448 134 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 TATDN1P1-201ENST00000414123 891 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 RPL23AP83-201ENST00000434984 473 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 C1DP5-201ENST00000525775 383 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 ATP5F1P5-201ENST00000526403 760 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AC118942.1-201ENST00000529674 1035 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AL033523.1-201ENST00000605153 153 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 SNORD14A-201ENST00000606526 91 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AC005332.10-201ENST00000612725 619 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AP001486.3-201ENST00000615334 372 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 AC025016.1-201ENST00000616746 682 ntBASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
COMMD3Q9UBI1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 MIR767-201ENST00000390228 109 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AL136372.1-201ENST00000403060 228 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 HMGB3P31-201ENST00000413333 595 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC004865.1-201ENST00000442276 1003 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 TPT1P14-201ENST00000448018 505 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 RPS15AP27-201ENST00000449183 343 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC022634.1-201ENST00000520765 532 ntBASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.63□□□□□ -2.15
COMMD3Q9UBI1 AP001646.1-201ENST00000527936 915 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms