Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 RN7SKP140-201ENST00000411196 284 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL513331.1-201ENST00000411908 397 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 MTCO1P21-201ENST00000416634 589 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC006946.1-201ENST00000429106 328 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 RPL31P35-201ENST00000431058 377 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 MTND1P34-201ENST00000438556 671 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL353748.1-201ENST00000440753 474 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC079448.1-201ENST00000449377 373 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC006480.1-201ENST00000449887 378 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 RPL31P60-201ENST00000478450 367 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AP002812.1-201ENST00000495378 474 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 RNU6-390P-201ENST00000516259 103 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AP001804.3-201ENST00000525146 880 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC004024.1-201ENST00000549244 247 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC087883.1-201ENST00000551882 391 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC009063.1-201ENST00000563342 702 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC008638.3-201ENST00000603341 463 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC080078.2-201ENST00000603766 501 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC136475.10-201ENST00000620253 385 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC019278.1-201ENST00000623516 479 ntBASIC3.85□□□□□ -1.79
LRFN1Q9P244 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN1Q9P244 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN1Q9P244 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LRFN1Q9P244 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN1Q9P244 AC092447.7-201ENST00000422212 1621 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 ZNF807-201ENST00000328088 1707 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 SNORD56.2-201ENST00000363242 71 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RNU6-169P-201ENST00000365336 107 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RNU5E-6P-201ENST00000365574 115 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RNU5A-6P-201ENST00000384136 116 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 Y_RNA.517-201ENST00000384551 106 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 BX295541.1-201ENST00000417774 250 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPL7P2-201ENST00000427639 268 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 NDUFB4P6-201ENST00000436819 366 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 RNA5SP246-201ENST00000458909 119 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RN7SL542P-201ENST00000467147 294 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPS26P28-201ENST00000470806 348 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPS23P3-201ENST00000470993 430 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC105252.1-201ENST00000503089 286 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC091133.4-201ENST00000511142 308 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 SNORA67.7-201ENST00000516664 135 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 PHBP17-201ENST00000528576 541 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC124947.2-202ENST00000552735 133 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPS3AP4-201ENST00000555161 764 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL391840.1-201ENST00000571144 367 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 MIR3158-1-201ENST00000583596 81 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC004492.1-201ENST00000607036 742 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AL161734.1-201ENST00000609720 557 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC015540.1-201ENST00000615828 501 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC068792.1-201ENST00000621354 417 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC244100.1-202ENST00000621554 382 ntBASIC3.84□□□□□ -1.79
LRFN1Q9P244 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN1Q9P244 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN1Q9P244 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LRFN1Q9P244 AC011266.1-201ENST00000624119 3569 ntBASIC3.84□□□□□ -1.8
LRFN1Q9P244 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.84□□□□□ -1.8
LRFN1Q9P244 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.84□□□□□ -1.8
LRFN1Q9P244 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
LRFN1Q9P244 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
LRFN1Q9P244 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
LRFN1Q9P244 EXOC5P1-201ENST00000510543 1969 ntBASIC3.83□□□□□ -1.8
LRFN1Q9P244 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRFN1Q9P244 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms