Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CTHRC1P1-201ENST00000605383 469 ntBASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 AC092807.2-201ENST00000609367 243 ntBASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
KCMF1Q9P0J7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC007390.2-201ENST00000606229 3803 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 SDHCP2-201ENST00000398565 501 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL359634.1-202ENST00000404721 284 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 FAR2P2-201ENST00000413041 594 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC009237.10-201ENST00000414112 510 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 ARL5AP1-201ENST00000418991 388 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC099677.1-201ENST00000420575 175 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RPL7P46-201ENST00000425129 740 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 FAR2P4-202ENST00000425399 584 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 SAR1AP4-201ENST00000429225 591 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 CCDC34P1-201ENST00000507441 517 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC117522.3-201ENST00000507974 584 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RNU6-390P-201ENST00000516259 103 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RN7SKP92-201ENST00000517266 244 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 RAB9BP1-201ENST00000519581 626 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL121821.2-201ENST00000556081 394 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.6-201ENST00000603753 252 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.11-201ENST00000604059 253 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC008162.1-201ENST00000604718 254 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.1-201ENST00000604752 252 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC113139.1-201ENST00000605049 239 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.5-201ENST00000605253 252 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.12-201ENST00000605291 253 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.8-201ENST00000605353 252 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL670379.7-201ENST00000605823 252 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 MIR6130-201ENST00000619419 109 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC110801.1-201ENST00000623590 212 ntBASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCMF1Q9P0J7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC087190.4-201ENST00000574616 8334 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 SNORA71.2-201ENST00000364941 134 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 MIR659-201ENST00000384963 97 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL121834.1-202ENST00000404494 277 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL590004.1-201ENST00000405321 300 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL160275.2-201ENST00000412010 394 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AF228730.4-201ENST00000421457 183 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC004866.2-201ENST00000438285 481 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 GAPDHP27-201ENST00000447427 1020 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 RNU6-1208P-201ENST00000459588 107 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC004801.2-202ENST00000463559 283 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms