Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 HSPE1P28-201ENST00000443139 211 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 SETP11-201ENST00000473027 690 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 RNA5SP468-201ENST00000516782 93 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 OR6C7P-201ENST00000547875 934 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 EEF1B2P4-201ENST00000551398 348 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 MIR3915-201ENST00000578518 97 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 WISP1-OT1-201ENST00000602893 642 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 Z99497.2-201ENST00000603634 310 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AC122133.1-201ENST00000613964 233 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AF246928.1-201ENST00000623768 87 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AC244517.1-201ENST00000606030 2086 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.9
NLGN3Q9NZ94 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC097714.1-201ENST00000511272 1647 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 SNORD116-2-201ENST00000384274 95 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 Y_RNA.560-201ENST00000384689 102 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 SNORD116-6-201ENST00000384711 96 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 SKINT1L-201ENST00000401057 817 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC092447.6-201ENST00000414578 210 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC083875.1-201ENST00000419509 405 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC019178.2-201ENST00000423595 505 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 UBE2FP3-201ENST00000436366 524 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 RSU1P2-202ENST00000437884 485 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 LSM1P1-201ENST00000438629 273 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 MTND2P22-201ENST00000444325 1033 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 Z83846.1-201ENST00000446798 265 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 RPS27AP8-201ENST00000452665 445 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC011825.1-201ENST00000484967 388 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC023424.2-201ENST00000493479 777 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 OR2A20P-203ENST00000498397 1268 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 RPF2P2-201ENST00000504693 896 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC087481.2-201ENST00000565492 330 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC012435.1-202ENST00000568772 240 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 SNORD84-203ENST00000584275 78 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 BBIP1P1-201ENST00000602999 279 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC013444.2-201ENST00000603317 787 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC121247.2-201ENST00000604776 136 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL137843.1-201ENST00000605078 385 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AL357080.1-201ENST00000617394 239 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AF117829.1-206ENST00000621883 3802 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 MTND4P16-201ENST00000466108 1367 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 AC012321.1-201ENST00000561622 1588 ntBASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NLGN3Q9NZ94 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 AL356473.1-201ENST00000406203 1408 ntBASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 RNU1-140P-201ENST00000365040 165 ntBASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
NLGN3Q9NZ94 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms