Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL118556.2-201ENST00000614375 824 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 MIR6883-201ENST00000614952 78 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL596245.1-201ENST00000618994 362 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC243312.2-201ENST00000623340 601 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC005832.2-201ENST00000538921 1430 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 OR5BR1P-201ENST00000524992 1330 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 OR5T3-201ENST00000303059 1023 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-492P-201ENST00000363035 104 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 RNU5E-8P-201ENST00000363502 116 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 SNORD114-30-201ENST00000364448 72 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SKP15-201ENST00000364742 309 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MIR197-201ENST00000384976 75 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MIR765-201ENST00000390226 114 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL031985.1-201ENST00000392713 418 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MIR888-201ENST00000401186 77 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL512604.1-201ENST00000404812 257 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC096664.2-201ENST00000411843 406 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CCDC58P2-201ENST00000417131 366 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 HMGB1P49-201ENST00000418882 569 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC003685.2-201ENST00000422795 395 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL121882.1-201ENST00000422893 417 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 C4BPAP2-201ENST00000428434 478 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL445584.1-201ENST00000431451 330 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 OR10R1P-201ENST00000441524 1141 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC124916.1-201ENST00000444020 547 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MTCO1P42-201ENST00000457379 726 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL133162.1-201ENST00000463228 453 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC093720.1-201ENST00000505681 714 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 ATP5LP3-201ENST00000514223 304 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 SNORA31.23-201ENST00000517219 133 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 IGHVIII-11-1-201ENST00000522733 267 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CYCSP2-201ENST00000558168 301 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC005951.2-201ENST00000576282 495 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL600P-201ENST00000581811 299 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MIR4276-201ENST00000584832 70 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL020997.2-201ENST00000602607 184 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP000403.1-201ENST00000603349 851 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP002906.1-201ENST00000603405 233 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP003973.1-201ENST00000604639 691 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 DUXAP10-204ENST00000612052 616 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MTND1P37-201ENST00000636562 264 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 MIR622-201ENST00000638396 96 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AL390862.1-201ENST00000635467 1469 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 HSPA8P4-201ENST00000511877 1920 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 AP006437.1-201ENST00000641440 3685 ntBASIC1.22□□□□□ -2.21
CDC42SE1Q9NRR8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC103710.2-202ENST00000641454 2853 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RNA5SP130-201ENST00000364431 114 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-1083P-201ENST00000384022 107 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-140P-201ENST00000384566 108 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 SNORA41-201ENST00000384675 132 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 U8.11-201ENST00000384699 133 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 U8.12-201ENST00000384701 133 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RPL23AP29-201ENST00000397284 453 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RNU2-33P-201ENST00000410344 192 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 BPY2DP-201ENST00000422208 265 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF863P-201ENST00000426746 417 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms