Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC093278.1-201ENST00000494700 600 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC021146.8-201ENST00000507455 733 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 MED28P6-201ENST00000558776 231 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC027807.1-201ENST00000559921 996 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC004987.4-201ENST00000603383 338 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC006386.1-201ENST00000619436 415 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AC023510.2-201ENST00000622162 746 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL078595.3-201ENST00000623815 1166 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 AL022578.1-201ENST00000439330 1433 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 CUL1P1-201ENST00000509510 2425 ntBASIC3.18□□□□□ -1.9
HPS4Q9NQG7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AL035425.3-201ENST00000564206 4996 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 RNU6-173P-201ENST00000364215 104 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 MIR135A2-201ENST00000384854 100 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 RNU6-882P-201ENST00000391025 103 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 SSXP9-201ENST00000417503 292 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC084290.1-201ENST00000434995 374 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 COX7BP2-201ENST00000437976 242 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC004866.2-201ENST00000438285 481 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC009969.1-201ENST00000438726 172 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 USP9YP25-201ENST00000457708 443 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 RPL31P50-201ENST00000471002 296 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC093677.1-201ENST00000514414 678 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 CYCSP2-201ENST00000558168 301 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 OR4K8P-201ENST00000578842 1048 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC106028.5-201ENST00000610332 395 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS4Q9NQG7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AC000403.1-201ENST00000613696 3585 ntBASIC3.17□□□□□ -1.9
HPS4Q9NQG7 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RNU6-343P-201ENST00000364709 104 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RPS15AP38-201ENST00000413110 372 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AL139421.1-201ENST00000423010 169 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC104332.2-201ENST00000429959 156 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RAC1P7-201ENST00000445367 377 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 OR2A20P-203ENST00000498397 1268 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 CBX3P3-201ENST00000508108 532 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 RNU6-150P-201ENST00000516237 95 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC009712.1-201ENST00000564938 316 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC090615.1-201ENST00000577519 154 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC006023.1-201ENST00000603944 259 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC012443.1-201ENST00000605605 231 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms