Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC087190.4-201ENST00000574616 8334 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTA1Q9NP79 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTA1Q9NP79 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL137003.2-201ENST00000606924 2538 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 MIR135A2-201ENST00000384854 100 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 MIR558-201ENST00000384920 94 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 MIR200C-201ENST00000384980 68 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 RNA5SP372-201ENST00000390836 115 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL590704.1-201ENST00000402856 794 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL078595.1-201ENST00000404458 226 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 MRPL50P2-201ENST00000416821 482 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 SNRPEP10-201ENST00000420249 274 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 ELOCP14-201ENST00000428070 331 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 RPS20P5-201ENST00000434808 360 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 ELOCP7-201ENST00000439968 331 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 RPS11P1-201ENST00000451072 473 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC007967.1-201ENST00000455422 1159 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC083798.1-201ENST00000472671 131 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 RNU7-143P-201ENST00000516781 65 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 OR5BN1P-201ENST00000532955 829 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC126177.3-201ENST00000551839 688 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 RPL23AP87-202ENST00000573039 466 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC007621.1-201ENST00000604544 437 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL034351.1-201ENST00000605288 668 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AL136363.1-201ENST00000605349 337 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC012442.3-202ENST00000636742 206 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 AC004925.1-201ENST00000624256 2706 ntBASIC4.56□□□□□ -1.68
VTA1Q9NP79 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTA1Q9NP79 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC073343.1-201ENST00000328239 651 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 RNU1-15P-201ENST00000353977 144 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 RNA5SP502-201ENST00000362694 119 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 RNA5SP107-201ENST00000411358 122 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 RPS23P10-201ENST00000416185 486 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 ZNF90P2-204ENST00000419323 1075 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 OR2AS1P-201ENST00000427827 319 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 NOTCH2P1-201ENST00000443481 624 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AL162389.1-201ENST00000449233 177 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AL356010.1-201ENST00000456364 102 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC092989.1-201ENST00000481235 277 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 RNU6-64P-201ENST00000517119 105 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC090281.1-201ENST00000523019 276 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AK6P1-201ENST00000540219 478 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 CYCSP30-201ENST00000546447 172 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 OR4K8P-201ENST00000578842 1048 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC012417.1-201ENST00000582307 1039 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC008536.2-201ENST00000607284 349 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 TUG1_2.1-201ENST00000614234 87 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 SNHG22-203ENST00000617833 660 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms