Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-472P-201ENST00000384299 107 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 RNU1-77P-201ENST00000390868 162 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 RNA5SP146-201ENST00000410743 123 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 RN7SKP126-201ENST00000411143 300 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 RNA5SP111-201ENST00000411386 101 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AL158071.1-201ENST00000430315 461 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 FTLP19-201ENST00000433300 394 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 SUMO1P2-201ENST00000452524 304 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AL353752.1-201ENST00000454946 260 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 RPS3AP41-201ENST00000462701 778 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC094085.1-201ENST00000468914 584 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 RPL7P23-201ENST00000493874 747 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 HIGD1AP14-201ENST00000507617 282 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC026801.2-201ENST00000515352 425 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 Y_RNA.680-201ENST00000516441 93 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC025423.5-201ENST00000550230 219 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC067852.3-201ENST00000589177 561 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AL021879.1-201ENST00000611756 288 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 AL606534.2-204ENST00000635008 178 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 EOGT-210ENST00000615922 1931 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC093591.2-201ENST00000565254 3843 ntBASIC4.89□□□□□ -1.63
SSU72Q9NP77 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC027287.1-201ENST00000553115 1453 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC138393.1-203ENST00000327086 343 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 Y_RNA.2-201ENST00000362330 96 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 RNU1-20P-201ENST00000363314 162 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 Y_RNA.447-201ENST00000384184 113 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 SNORA41-201ENST00000384675 132 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 MIR135A2-201ENST00000384854 100 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 CYCSP10-201ENST00000417973 294 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 RPS26P47-201ENST00000427219 348 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 ARL5AP4-201ENST00000430731 512 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 CYCSP6-201ENST00000434498 302 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 CYCSP43-201ENST00000438233 310 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 FTH1P25-201ENST00000447665 469 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 CHEK2P4-201ENST00000450340 246 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 RPS24P6-201ENST00000452670 400 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 RNU7-187P-201ENST00000458985 68 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 RPL37P6-202ENST00000464216 403 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 RPS21P4-201ENST00000487122 248 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 AL355297.3-201ENST00000604082 446 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 AL031176.1-201ENST00000604554 466 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 AL034351.1-201ENST00000605288 668 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 HMGB1P50-201ENST00000605814 607 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 MIR7109-201ENST00000613748 65 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 AC243312.2-201ENST00000623340 601 ntBASIC4.88□□□□□ -1.63
SSU72Q9NP77 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSU72Q9NP77 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSU72Q9NP77 DDX10P1-201ENST00000448545 1933 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 SMG1P6-201ENST00000532337 2930 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 RNU6-1303P-201ENST00000364841 107 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSU72Q9NP77 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 RNU6-101P-201ENST00000410323 104 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.87□□□□□ -1.63
SSU72Q9NP77 AL591704.1-201ENST00000432574 275 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 RHOT1P3-201ENST00000436571 331 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 HSFY6P-201ENST00000445573 403 ntBASIC4.87□□□□□ -1.63
SSU72Q9NP77 RPL23AP65-201ENST00000475608 468 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms