Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RPL38P4-201ENST00000502376 214 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 OR5BM1P-201ENST00000512021 366 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC087272.1-201ENST00000523624 533 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 ISCA1P3-201ENST00000577104 373 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC009314.1-201ENST00000603871 304 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC010738.1-201ENST00000604970 987 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AC097372.4-201ENST00000625025 466 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 SGO1P2-201ENST00000429458 1589 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 AL359893.1-201ENST00000447628 1580 ntBASIC1.77□□□□□ -2.13
KIAA1549Q9HCM3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 MIR627-201ENST00000384979 97 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 ATP5F1P6-201ENST00000402768 767 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 PRRC2CP1-201ENST00000404428 159 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 CYCSP49-201ENST00000420810 319 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC007182.2-201ENST00000489251 402 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC026241.1-201ENST00000517873 2142 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AP000790.1-201ENST00000528891 737 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC126177.3-201ENST00000551839 688 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC068880.5-201ENST00000624331 290 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 MTND4P1-201ENST00000457501 1466 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL606495.1-201ENST00000422100 813 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL603825.1-201ENST00000438481 80 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 Z96811.1-201ENST00000445880 108 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC087879.1-201ENST00000474343 374 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 MTAPP1-201ENST00000489154 819 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 MLLT10P2-201ENST00000506434 249 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC015712.3-201ENST00000559380 164 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AP004247.3-201ENST00000608682 624 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC104307.1-201ENST00000616142 196 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AL449363.1-201ENST00000617815 186 ntBASIC1.76□□□□□ -2.13
KIAA1549Q9HCM3 AC002543.1-201ENST00000299783 1954 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 MIRLET7G-201ENST00000362280 84 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 MIR421-201ENST00000365696 85 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 MIR144-201ENST00000384886 86 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 OFD1P18Y-201ENST00000420889 959 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 SRIP2-201ENST00000428470 166 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AL645638.1-201ENST00000440519 361 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 RPS29P20-201ENST00000489592 171 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AC091917.2-201ENST00000505002 744 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AC104057.1-201ENST00000515547 497 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AC110588.1-201ENST00000559699 137 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 AC095031.1-201ENST00000623685 672 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 PISRT1-201ENST00000626175 531 ntBASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.75□□□□□ -2.13
KIAA1549Q9HCM3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 WARS2P1-201ENST00000429678 537 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 XKRY2-201ENST00000442362 1093 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 HMGB1P46-201ENST00000520062 610 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 HAUS1P3-201ENST00000523909 662 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC093838.1-201ENST00000613014 469 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC245884.12-201ENST00000615364 59 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AP000676.4-201ENST00000624659 623 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 ZNF734P-201ENST00000419494 1534 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 MIR1323-201ENST00000408090 73 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 RNU4-74P-201ENST00000411280 161 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms