Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ATP5JP1-201ENST00000431631 322 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 CBWD4P-201ENST00000445695 655 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL590399.6-201ENST00000446396 307 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC006517.1-201ENST00000480485 328 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 SNORD27.1-201ENST00000516319 72 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU7-51P-201ENST00000516560 62 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 HMGB1P41-201ENST00000520234 440 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC103783.1-201ENST00000520506 373 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 OR4R3P-201ENST00000525084 838 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 DEFB108D-201ENST00000527787 222 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 GLYCAM1-201ENST00000546596 285 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC007424.1-203ENST00000554613 687 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC084783.1-201ENST00000565846 910 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 VN1R85P-201ENST00000601587 426 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL356055.1-201ENST00000602528 446 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC087045.1-201ENST00000605856 382 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL121992.2-201ENST00000606262 256 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC090948.1-201ENST00000607464 549 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC130324.3-201ENST00000614165 542 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC079684.1-201ENST00000621405 437 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC067931.1-201ENST00000624190 671 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AP000843.1-201ENST00000624880 701 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-845P-201ENST00000362578 103 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.142-201ENST00000363491 102 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-263P-201ENST00000363811 107 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 MIR153-1-201ENST00000384914 90 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 MIR454-201ENST00000390180 115 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL136116.1-201ENST00000403591 381 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL445189.1-201ENST00000405722 338 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 ELOCP19-201ENST00000411919 318 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 SDCBPP3-201ENST00000419629 891 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 CYP4F29P-201ENST00000420685 446 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RBMY1KP-201ENST00000423480 476 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RPEP3-201ENST00000425462 676 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RPL36AP53-201ENST00000432891 316 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 MTATP6P16-201ENST00000434543 526 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC016696.1-201ENST00000446949 318 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC010655.1-201ENST00000449336 292 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 GMFBP1-201ENST00000467831 427 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RPL23AP2-201ENST00000471227 466 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC026427.2-201ENST00000506228 536 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 FAM60DP-201ENST00000524174 632 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 ARL2BPP2-201ENST00000550907 489 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC010525.2-201ENST00000590920 195 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC079587.1-201ENST00000603846 277 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC010591.1-201ENST00000603941 649 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC105429.2-201ENST00000610567 517 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL603758.1-201ENST00000618654 241 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC007546.1-201ENST00000619452 559 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL023881.1-201ENST00000621088 301 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AC074029.4-201ENST00000624796 1859 ntBASIC4□□□□□ -1.77
AMBRA1Q9C0C7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4□□□□□ -1.77
AMBRA1Q9C0C7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNA5SP447-201ENST00000363749 119 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-332P-201ENST00000391193 108 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNU2-39P-201ENST00000410604 198 ntBASIC3.99□□□□□ -1.77
AMBRA1Q9C0C7 RNA5SP107-201ENST00000411358 122 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms