Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RNU1-123P-201ENST00000458950 160 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RPS15AP36-201ENST00000492022 382 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 SNORD53B-201ENST00000577887 78 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 AC104307.1-201ENST00000616142 196 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 AC006026.1-201ENST00000444025 1803 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 SUMO2P12-201ENST00000405924 140 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 USP9YP10-201ENST00000454868 628 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 SNORD59.2-201ENST00000516873 68 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 MIR4421-201ENST00000578133 69 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 RMST_6.1-201ENST00000611980 203 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 AC106730.3-201ENST00000624568 641 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 AP000676.4-201ENST00000624659 623 ntBASIC2.46□□□□□ -2.02
SCAPERQ9BY12 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.46□□□□□ -2.02
SCAPERQ9BY12 AC103710.2-202ENST00000641454 2853 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 RNU4-7P-201ENST00000364758 141 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AL356057.2-201ENST00000403318 432 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 MTND4LP21-201ENST00000415303 295 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 VN1R31P-201ENST00000417498 730 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 RPL7P37-201ENST00000425095 738 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 SSXP4-201ENST00000451349 245 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC104472.2-201ENST00000469035 601 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 RNA5SP102-201ENST00000516865 106 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AC098848.2-201ENST00000588023 330 ntBASIC2.45□□□□□ -2.02
SCAPERQ9BY12 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCAPERQ9BY12 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AL596028.1-201ENST00000326971 197 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 SNORA7.1-201ENST00000363750 139 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 Y_RNA.191-201ENST00000363972 113 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 MIR92A2-201ENST00000385299 75 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 RNA5SP105-201ENST00000391123 113 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 PGBD4P3-201ENST00000440731 581 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 HMGN2P21-201ENST00000447764 270 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 RPL23AP55-201ENST00000498163 452 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC010627.1-201ENST00000503819 1294 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 HMGB3P3-201ENST00000510526 400 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 PTP4A1P6-201ENST00000531034 478 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AL049838.1-201ENST00000563647 981 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 FAM106CP-201ENST00000582212 507 ntBASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SCAPERQ9BY12 RNU6-225P-201ENST00000384613 103 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 PAICSP7-201ENST00000419829 962 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AMD1P1-201ENST00000457220 922 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AL121594.1-201ENST00000475906 575 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 OR5AQ1P-201ENST00000527596 927 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AL161670.1-201ENST00000554348 137 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AC015720.1-201ENST00000565251 277 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AC124283.4-201ENST00000581815 456 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 KATNBL1P1-201ENST00000605192 748 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 RMST_2.1-201ENST00000617263 136 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AL359740.1-201ENST00000624340 592 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.43□□□□□ -2.02
SCAPERQ9BY12 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCAPERQ9BY12 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 SNORD48-201ENST00000364953 64 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 RNU6-53P-201ENST00000365367 106 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AF279873.1-201ENST00000523393 313 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AL354943.1-201ENST00000572103 781 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms