Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
TRAF4Q9BUZ4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 SNORA31-201ENST00000362607 130 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 Y_RNA.194-201ENST00000363985 102 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 SNORD46.1-201ENST00000364139 104 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 Y_RNA.436-201ENST00000384097 102 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RPL21P17-201ENST00000397467 475 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 MTND1P21-201ENST00000412991 285 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 CDK8P2-201ENST00000415020 547 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RPL21P32-201ENST00000419877 477 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 MTCO1P39-201ENST00000426148 480 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL022238.1-201ENST00000442557 355 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RANP8-201ENST00000444720 713 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 USP9YP12-201ENST00000450481 570 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 RNU6-956P-201ENST00000458868 103 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AP000873.5-201ENST00000533906 236 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC006362.1-201ENST00000567392 174 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC012182.1-201ENST00000570133 895 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 KLKP1-201ENST00000595979 403 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL391813.2-201ENST00000609113 322 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC009159.1-201ENST00000618386 642 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 MIR6130-201ENST00000619419 109 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AL034408.1-202ENST00000636088 415 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 AC009093.8-201ENST00000641769 292 ntBASIC3.3□□□□□ -1.88
TRAF4Q9BUZ4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 TEX21P-201ENST00000447107 1476 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 MIR208A-201ENST00000362287 71 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 SNORD116-4-201ENST00000384733 96 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 MIR23A-201ENST00000385245 73 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 RNU6-882P-201ENST00000391025 103 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 RNU6-754P-201ENST00000391166 107 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 DEFB108C-201ENST00000400154 252 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL136116.1-201ENST00000403591 381 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 Y_RNA.598-201ENST00000410480 95 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 HMGN1P14-201ENST00000412459 517 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 SSXP9-201ENST00000417503 292 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL137014.1-201ENST00000420490 1226 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 MTCO2P34-201ENST00000421994 607 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL139247.1-201ENST00000422768 325 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 DUTP6-201ENST00000425573 462 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC079780.1-201ENST00000428259 207 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC091286.1-201ENST00000431233 461 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 UBE2V1P13-201ENST00000436983 439 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 SSXP1-201ENST00000453640 473 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 SNRPFP4-201ENST00000456366 242 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC010285.1-201ENST00000470580 392 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 RPS3AP50-201ENST00000487064 803 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 UBE2CP3-201ENST00000502715 450 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC091435.1-201ENST00000505442 584 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 ARL2BPP4-201ENST00000506854 471 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 HMGN1P11-201ENST00000508668 303 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 RNA5SP164-201ENST00000516533 110 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF4Q9BUZ4 AC109635.4-202ENST00000531666 412 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms