Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 BTF3L4P3-201ENST00000418879 476 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 NCOR1P3-201ENST00000420479 303 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RPL23AP38-201ENST00000423801 469 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MED13P1-201ENST00000428342 171 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC004975.1-201ENST00000428733 208 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 HMGB1P18-201ENST00000438801 619 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL589765.3-201ENST00000446084 462 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RPL36AP13-201ENST00000457490 317 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RPS29P15-201ENST00000458329 171 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 Y_RNA.632-201ENST00000459189 102 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC007547.1-201ENST00000462177 490 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 RN7SL812P-201ENST00000493791 279 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC135721.1-201ENST00000497954 479 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 TTC39CP1-201ENST00000512513 755 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 OR5B10P-201ENST00000532869 642 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC006254.3-201ENST00000603353 884 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC113139.1-201ENST00000605049 239 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL365204.3-201ENST00000612448 685 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC104237.2-201ENST00000612456 443 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MIR6716-201ENST00000613413 80 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 uc_338.13-201ENST00000618243 179 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL603758.1-201ENST00000618654 241 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AC055839.1-201ENST00000634467 498 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.22□□□□□ -1.73
NDC1Q9BTX1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NDC1Q9BTX1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.21□□□□□ -1.73
NDC1Q9BTX1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.21□□□□□ -1.73
NDC1Q9BTX1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AL049555.1-201ENST00000562834 1933 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 SNORA62.1-201ENST00000364287 154 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RNU6-754P-201ENST00000391166 107 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RPS20P14-201ENST00000412545 360 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 OR2AS1P-201ENST00000427827 319 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RPL21P91-201ENST00000429231 479 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AL132765.1-201ENST00000434165 553 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 CKS1BP5-201ENST00000434172 273 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC016696.1-201ENST00000446949 318 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC073587.1-201ENST00000447093 876 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RPL7L1P8-201ENST00000469911 741 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC126389.1-201ENST00000477436 290 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 RPL21P99-201ENST00000480369 423 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC012158.1-204ENST00000483430 465 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.691-201ENST00000516611 103 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 HMGB1P41-201ENST00000520234 440 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AP005597.4-201ENST00000526762 229 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC026464.5-201ENST00000562497 722 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 MIR3939-201ENST00000582614 106 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 IPO5P1-202ENST00000600039 287 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC113403.1-201ENST00000604910 193 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC093838.1-201ENST00000613014 469 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AL136313.1-201ENST00000624804 202 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 AL139811.1-201ENST00000424779 2299 ntBASIC4.21□□□□□ -1.74
NDC1Q9BTX1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDC1Q9BTX1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms