Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AP003465.2-201ENST00000602571 373 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC010591.1-201ENST00000603941 649 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC245517.5-201ENST00000611529 162 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AL592295.2-201ENST00000612578 206 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC136475.10-201ENST00000620253 385 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC243312.2-201ENST00000623340 601 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AL138713.1-201ENST00000624026 2130 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 AC019226.1-201ENST00000625666 515 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 LINC02471-203ENST00000641941 4752 ntBASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PAAF1Q9BRP4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 MIR135A2-201ENST00000384854 100 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC007283.2-201ENST00000424739 197 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 DPPA2P1-201ENST00000428060 556 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC133104.1-201ENST00000429100 218 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC073063.1-201ENST00000434352 607 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC006480.1-201ENST00000449887 378 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL359385.1-201ENST00000456509 365 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 HMGB3P30-201ENST00000457863 606 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC007182.2-201ENST00000489251 402 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC135721.1-201ENST00000497954 479 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC114967.1-201ENST00000504890 259 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC108078.1-201ENST00000508073 725 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC114797.1-201ENST00000514003 728 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC018630.1-201ENST00000541376 925 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL161756.2-201ENST00000604597 246 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 uc_338.12-201ENST00000616344 181 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL160394.1-201ENST00000624765 724 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 MIR6863-201ENST00000636112 90 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AC004925.1-201ENST00000624256 2706 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 AL365440.1-201ENST00000436135 2167 ntBASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.92□□□□□ -1.78
PAAF1Q9BRP4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RNU6-335P-201ENST00000364563 113 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RHOT1P2-201ENST00000366423 333 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 HLFP1-201ENST00000402375 499 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RNU2-43P-201ENST00000410306 190 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RNU4-65P-201ENST00000410473 140 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 SSXP9-201ENST00000417503 292 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 ISCA1P1-201ENST00000426679 387 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 CYCSP4-201ENST00000429682 331 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC073464.1-201ENST00000429823 534 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 DNAJC19P4-201ENST00000440115 345 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC079448.1-201ENST00000449377 373 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 MTND1P12-201ENST00000455231 147 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 MTCO2P29-201ENST00000465212 189 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 S100A11P1-201ENST00000477525 312 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 MLLT10P2-201ENST00000506434 249 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AF213884.2-201ENST00000510417 903 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RN7SKP244-201ENST00000516513 307 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RNA5SP337-201ENST00000517007 109 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 RANP9-201ENST00000519957 271 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 DEFB108D-201ENST00000527787 222 ntBASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.91□□□□□ -1.78
PAAF1Q9BRP4 ZNF519P2-201ENST00000557032 169 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms