Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 ARL4AP2-201ENST00000507378 601 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC113420.1-201ENST00000507903 571 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC006445.2-201ENST00000510061 472 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC093752.1-206ENST00000511823 336 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC010376.1-201ENST00000522101 334 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 CASP1P1-201ENST00000526345 212 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 NDUFS5P6-201ENST00000529136 295 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXC2Q99958 OR4K8P-201ENST00000578842 1048 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC091057.3-201ENST00000602684 733 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC096947.1-201ENST00000603233 470 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AL139022.2-201ENST00000606934 443 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC080013.4-201ENST00000607624 649 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 AC104763.3-201ENST00000613765 618 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 AC084824.4-201ENST00000620106 731 ntBASIC2.52□□□□□ -2.01
FOXC2Q99958 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
FOXC2Q99958 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
FOXC2Q99958 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
FOXC2Q99958 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
FOXC2Q99958 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AP003122.5-201ENST00000527668 3766 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FOXC2Q99958 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
FOXC2Q99958 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXC2Q99958 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXC2Q99958 FRG1BP-201ENST00000278882 761 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 SNRPEP3-201ENST00000338402 276 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
FOXC2Q99958 ATG3P1-201ENST00000419507 911 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 AL354692.1-201ENST00000423044 315 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 HMGN2P30-201ENST00000423237 256 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FOXC2Q99958 C1DP1-201ENST00000426049 402 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 ISCA1P2-201ENST00000438679 421 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC092427.1-201ENST00000439177 601 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 AL592447.1-201ENST00000447592 540 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC005297.2-201ENST00000450430 606 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC079776.3-201ENST00000450665 370 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 SNRPGP6-201ENST00000451124 220 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 RPS29P12-201ENST00000460178 152 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
FOXC2Q99958 AC021205.2-201ENST00000480069 347 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.51□□□□□ -2.01
FOXC2Q99958 AC245166.1-201ENST00000521012 253 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 DEFB130C-202ENST00000530001 230 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 MIR4637-201ENST00000582405 84 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC105224.1-201ENST00000587055 421 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 DUXAP11-201ENST00000603858 526 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AC069431.2-201ENST00000604149 1099 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AL158050.2-201ENST00000605336 568 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AL391262.2-201ENST00000622466 494 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AP003485.1-201ENST00000625093 753 ntBASIC2.51□□□□□ -2.01
FOXC2Q99958 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.51□□□□□ -2.01
FOXC2Q99958 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXC2Q99958 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.51□□□□□ -2.01
FOXC2Q99958 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FOXC2Q99958 RNU4-51P-201ENST00000364206 140 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
FOXC2Q99958 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FOXC2Q99958 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 AL450338.1-201ENST00000407987 512 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 MIR1290-201ENST00000408735 78 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.5□□□□□ -2.01
FOXC2Q99958 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.5□□□□□ -2.01
FOXC2Q99958 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 GTF2IP7-202ENST00000436677 309 ntBASIC2.5□□□□□ -2.01
FOXC2Q99958 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms