Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC012119.1-201ENST00000603184 222 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AP000942.4-201ENST00000604811 241 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 MIR6128-201ENST00000615528 109 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC131238.1-201ENST00000617135 328 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC007823.1-201ENST00000569932 1566 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC090337.1-201ENST00000579651 2074 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF2Q99805 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF2Q99805 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 TLK1P1-201ENST00000456760 2440 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 MTND5P10-201ENST00000603719 1809 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
TM9SF2Q99805 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TM9SF2Q99805 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
TM9SF2Q99805 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.71□□□□□ -1.65
TM9SF2Q99805 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TM9SF2Q99805 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF2Q99805 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 SNORA33.2-201ENST00000365413 134 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF2Q99805 RNU6-128P-201ENST00000383976 107 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 RNU6-1160P-201ENST00000384546 104 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AL645733.1-201ENST00000402250 217 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 RNU6-954P-201ENST00000411355 107 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC244098.2-201ENST00000422068 99 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 NRBF2P3-201ENST00000432731 865 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC008264.1-201ENST00000447612 367 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 HMGB3P22-202ENST00000451823 572 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 MTCO3P10-201ENST00000455912 772 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC087884.1-201ENST00000469738 328 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 HSPE1P6-201ENST00000479457 291 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AL049874.1-201ENST00000489560 388 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 SNORA31.20-201ENST00000517111 133 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 RNA5SP373-201ENST00000517271 95 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 RANP9-201ENST00000519957 271 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 CYCSP27-201ENST00000527643 293 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC019193.3-201ENST00000609144 554 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AL157817.1-201ENST00000614264 790 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 AC118658.2-201ENST00000618697 459 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF2Q99805 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF2Q99805 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF2Q99805 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TM9SF2Q99805 AL356489.2-201ENST00000566968 3528 ntBASIC4.71□□□□□ -1.66
TM9SF2Q99805 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC004925.1-201ENST00000624256 2706 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 Z73965.1-201ENST00000623412 2297 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 RN7SKP153-201ENST00000365026 316 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF2Q99805 Y_RNA.395-201ENST00000383945 109 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 RNU6-308P-201ENST00000390957 107 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC093162.1-201ENST00000419682 124 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 RPL31P12-201ENST00000422587 358 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 RPL7P28-201ENST00000437739 740 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC104634.1-201ENST00000452720 462 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC009127.1-201ENST00000467090 155 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC108860.1-201ENST00000484521 383 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC058823.1-201ENST00000485315 474 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC079140.5-201ENST00000507882 310 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC002456.2-201ENST00000509356 380 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 RNU6-1213P-201ENST00000517075 94 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC134698.5-201ENST00000519444 336 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AC090151.1-201ENST00000520784 730 ntBASIC4.7□□□□□ -1.66
TM9SF2Q99805 AP000676.2-201ENST00000529711 301 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms