Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS20P20-201ENST00000460498 340 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL049714.1-201ENST00000466686 347 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 MTCO2P30-201ENST00000503662 364 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC114797.1-201ENST00000514003 728 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 RNA5SP401-201ENST00000515920 127 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 SNORA40.12-201ENST00000516329 111 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 NARSP2-201ENST00000518524 679 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AP000857.1-201ENST00000532151 543 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL353621.2-201ENST00000605340 133 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 U7.8-201ENST00000619968 63 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AP005019.3-201ENST00000620418 560 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC010338.1-201ENST00000621823 717 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC008785.1-201ENST00000624475 456 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 FAM91A3P-201ENST00000456826 2544 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC090229.1-201ENST00000590983 1609 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RNU6-223P-201ENST00000362830 107 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RNU6-74P-201ENST00000384235 107 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RPS20P14-201ENST00000412545 360 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL513185.2-201ENST00000425543 193 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RNU7-59P-201ENST00000459101 61 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 RNU6-261P-201ENST00000459506 102 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC233702.1-201ENST00000482905 502 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 RPS3AP50-201ENST00000487064 803 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC068305.1-201ENST00000497406 726 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 RNA5SP143-201ENST00000516936 115 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 IGLVIV-65-201ENST00000517313 360 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 GLUD1P4-201ENST00000590914 418 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL117336.2-201ENST00000602435 335 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL356055.1-201ENST00000602528 446 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL158211.4-201ENST00000606988 584 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC090948.1-201ENST00000607464 549 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AL354950.2-201ENST00000617939 290 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC006504.8-201ENST00000621046 635 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 MIR6830-201ENST00000636015 70 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC026951.1-201ENST00000559530 2459 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 AC025031.4-201ENST00000621248 3271 ntBASIC3.89□□□□□ -1.79
SNX18Q96RF0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX18Q96RF0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
SNX18Q96RF0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX18Q96RF0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX18Q96RF0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 RNU4-25P-201ENST00000410569 230 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 RNU6-516P-201ENST00000411381 104 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 ELOCP19-201ENST00000411919 318 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL732292.1-201ENST00000426692 226 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC010655.1-201ENST00000449336 292 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC234775.1-201ENST00000454247 670 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 DHFRP3-201ENST00000455595 559 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 RNU7-63P-201ENST00000459054 62 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 snoU13.3-201ENST00000459441 104 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms