Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MTCYBP19-201ENST00000517463 1124 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AC013444.2-201ENST00000603317 787 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 BNIP3P4-201ENST00000604946 565 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AC074140.1-201ENST00000621617 208 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 RPS3AP44-201ENST00000425466 790 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 THAP5P1-201ENST00000439089 262 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC079203.1-201ENST00000487972 404 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 FABP5P5-201ENST00000515537 406 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 RNU6-405P-201ENST00000516637 110 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 RNU6-467P-201ENST00000517027 110 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 BNIP3P7-201ENST00000605641 516 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC083806.3-201ENST00000614016 455 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC112191.3-201ENST00000604371 277 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 MTCO1P14-201ENST00000441695 1559 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 RNU6-984P-201ENST00000363236 109 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 KATNBL1P4-201ENST00000503545 918 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 AC034268.2-201ENST00000571784 482 ntBASIC1.29□□□□□ -2.2
CSMD1Q96PZ7 SNRPEP2-201ENST00000397592 279 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AL513185.2-201ENST00000425543 193 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 BX510359.4-201ENST00000423750 193 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AC107015.1-201ENST00000466902 747 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 SUB1P4-201ENST00000566062 339 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 MTND5P10-201ENST00000603719 1809 ntBASIC1.28□□□□□ -2.2
CSMD1Q96PZ7 RNU6-105P-201ENST00000363909 104 ntBASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 MIR216A-201ENST00000385063 110 ntBASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AL691517.1-201ENST00000440833 1235 ntBASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AC105313.1-201ENST00000509121 353 ntBASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.21
CSMD1Q96PZ7 HMGB1P5-201ENST00000255320 642 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 COX6CP14-201ENST00000469580 174 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC023813.2-201ENST00000564321 469 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AL596028.1-201ENST00000326971 197 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 SNRPEP3-201ENST00000338402 276 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC090774.1-201ENST00000435925 246 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 RPS26P24-201ENST00000497656 331 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC090819.1-201ENST00000523800 1111 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC091152.2-201ENST00000591628 2569 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC092638.1-201ENST00000411966 1275 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 SEC63P1-201ENST00000425785 1258 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC114973.1-201ENST00000429057 632 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 GTF2IP7-202ENST00000436677 309 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 AL449363.1-201ENST00000617815 186 ntBASIC1.27□□□□□ -2.21
CSMD1Q96PZ7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 MIR193B-201ENST00000384907 83 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 AC018630.2-202ENST00000422992 927 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 AC107032.1-201ENST00000485945 480 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 MTND5P4-201ENST00000514978 288 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 AC104986.1-201ENST00000517978 436 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 MIR5000-201ENST00000577717 103 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 AL359851.1-201ENST00000569460 4997 ntBASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CSMD1Q96PZ7 RPL17P12-201ENST00000413391 526 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms