Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC025034.2-201ENST00000623264 286 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SYNGAP1Q96PV0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.34□□□□□ -1.56
SYNGAP1Q96PV0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.34□□□□□ -1.56
SYNGAP1Q96PV0 MTND5P28-201ENST00000438005 1594 ntBASIC5.34□□□□□ -1.56
SYNGAP1Q96PV0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 RAD17P1-201ENST00000418130 2042 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.47-201ENST00000362697 108 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.112-201ENST00000363250 102 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 U3.12-201ENST00000364498 214 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.527-201ENST00000384573 102 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.557-201ENST00000384680 107 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 MRPL42P3-201ENST00000401492 326 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL136372.1-201ENST00000403060 228 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 RPL6P29-201ENST00000414863 865 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL139095.3-201ENST00000419672 1203 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL731563.1-201ENST00000442202 214 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AL031584.1-201ENST00000447169 754 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 ELOCP24-201ENST00000456370 334 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC079804.1-201ENST00000461922 436 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC011276.1-201ENST00000469688 323 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC109327.1-201ENST00000471666 403 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 CCDC34P1-201ENST00000507441 517 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC015795.1-201ENST00000513669 327 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-976P-201ENST00000516086 111 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC090136.1-201ENST00000520009 240 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AP000857.1-201ENST00000532151 543 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 IMMP1LP2-201ENST00000552954 492 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 BNIP3P16-201ENST00000589779 534 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 CDC27P3-201ENST00000635418 1910 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 OR14L1P-202ENST00000641545 3009 ntBASIC5.33□□□□□ -1.56
SYNGAP1Q96PV0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.158-201ENST00000363651 101 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.188-201ENST00000363952 111 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-188P-201ENST00000364207 107 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNVU1-3-201ENST00000364313 161 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNA5SP509-201ENST00000364577 119 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-702P-201ENST00000364982 107 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 SNORA9-201ENST00000384215 133 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 Y_RNA.482-201ENST00000384377 111 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-310P-201ENST00000384655 107 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU2-36P-201ENST00000410361 191 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC009310.1-201ENST00000414414 451 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC114491.1-201ENST00000416095 246 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RPL36AP10-201ENST00000421785 322 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RPL12P25-201ENST00000455592 494 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU7-59P-201ENST00000459101 61 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 snoU13.7-201ENST00000459220 104 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC104806.1-201ENST00000508720 308 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC017037.2-201ENST00000513850 890 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 RNU6-1271P-201ENST00000517049 105 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AP002404.1-201ENST00000532005 451 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AL161670.1-201ENST00000554348 137 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 uc_338.11-201ENST00000619132 160 ntBASIC5.32□□□□□ -1.56
SYNGAP1Q96PV0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms