Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 MIR4738-201ENST00000579134 87 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 MIR3682-201ENST00000581338 84 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC002545.1-201ENST00000592511 181 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC087752.4-201ENST00000605911 462 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC103710.2-201ENST00000609912 942 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC131902.3-201ENST00000611767 581 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC091304.9-201ENST00000612091 226 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AP001506.1-201ENST00000615444 211 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
CMTM3Q96MX0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CMTM3Q96MX0 MFSD8-236ENST00000641509 4050 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 GNG5P1-201ENST00000255500 204 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNU6-511P-201ENST00000363496 107 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNU4-1-201ENST00000363925 141 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 U3.11-201ENST00000364476 212 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNU6-741P-201ENST00000383889 107 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 MIR192-201ENST00000384915 110 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPL7P60-201ENST00000397636 735 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNU4-25P-201ENST00000410569 230 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL590139.1-201ENST00000416267 400 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC137499.1-201ENST00000427602 88 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPL21P40-201ENST00000428586 483 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC119618.1-201ENST00000434191 222 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 MTCO2P16-201ENST00000436962 677 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AP000936.2-201ENST00000447151 681 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL513533.1-201ENST00000453728 415 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 MTCO2P29-201ENST00000465212 189 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPS29P22-201ENST00000472363 168 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RPS20P22-201ENST00000473700 357 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RBM43P1-201ENST00000476891 1081 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 VN1R105P-201ENST00000486595 910 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 TRBV12-2-201ENST00000489763 344 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC117522.2-201ENST00000510049 657 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC008958.1-201ENST00000511047 682 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNA5SP337-201ENST00000517007 109 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RNU2-46P-201ENST00000517038 113 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC011979.2-201ENST00000527568 352 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AP002453.2-201ENST00000533503 320 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AP000873.5-201ENST00000533906 236 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC091516.1-201ENST00000549191 703 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 NBR2-204ENST00000587322 63 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 SEPT7P9-203ENST00000604116 343 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 HSPE1P7-201ENST00000604681 321 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 RMST_8.1-201ENST00000610287 165 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 MIR7151-201ENST00000617477 60 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CMTM3Q96MX0 AC012618.3-205ENST00000637896 1496 ntBASIC3.38□□□□□ -1.87
CMTM3Q96MX0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 TEX21P-201ENST00000447107 1476 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC079741.1-201ENST00000321498 212 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNA5SP443-201ENST00000363083 132 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 U8.3-201ENST00000363321 132 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNU6-297P-201ENST00000384636 107 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNA5SP38-201ENST00000410750 119 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 SNORA57.3-201ENST00000411095 141 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 FCF1P1-201ENST00000432690 571 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 USP9YP15-201ENST00000442391 422 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 NDUFA12P1-201ENST00000455914 406 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNU6-420P-201ENST00000458780 107 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 RNU6-956P-201ENST00000458868 103 ntBASIC3.37□□□□□ -1.87
CMTM3Q96MX0 SNORD97-201ENST00000459187 142 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms