Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC092447.7-201ENST00000422212 1621 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 SNORD56.2-201ENST00000363242 71 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 U3.42-201ENST00000408746 214 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 RNU2-66P-201ENST00000410650 161 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 SNORA71B-202ENST00000439232 272 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 RN7SKP122-201ENST00000515923 296 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 NRON-201ENST00000517270 370 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 AP003730.1-201ENST00000524605 285 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 ARL2BPP2-201ENST00000550907 489 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AL391840.1-201ENST00000571144 367 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC078795.2-201ENST00000602835 1252 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 MIR98-201ENST00000606724 119 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC099842.1-201ENST00000619919 596 ntBASIC4.03□□□□□ -1.76
CCDC138Q96M89 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 AC002546.1-201ENST00000588041 2504 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 HSPE1P11-201ENST00000339579 310 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 PPIAP31-201ENST00000405422 495 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AL591034.1-201ENST00000407447 340 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 UBE2D3P2-201ENST00000424409 445 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC010975.2-201ENST00000427781 588 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC017083.1-201ENST00000428093 483 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AL590383.1-201ENST00000428602 75 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC091390.1-201ENST00000433904 331 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC020550.1-201ENST00000447385 163 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 MTCO3P20-201ENST00000454926 688 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 VN1R105P-201ENST00000486595 910 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC138853.1-201ENST00000503549 823 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC025554.1-201ENST00000505641 188 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC093824.1-201ENST00000508796 343 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 SNORA31.9-201ENST00000516429 84 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 RNU7-51P-201ENST00000516560 62 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC012531.5-201ENST00000611375 151 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC084782.3-201ENST00000612282 578 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC015540.1-201ENST00000615828 501 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 AC244100.1-202ENST00000621554 382 ntBASIC4.02□□□□□ -1.77
CCDC138Q96M89 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC138Q96M89 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC138Q96M89 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 OR5J1P-201ENST00000313544 939 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RNU6-169P-201ENST00000365336 107 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 SNORA37-201ENST00000384504 129 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 Y_RNA.517-201ENST00000384551 106 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 Z98941.1-201ENST00000407764 100 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RNU2-36P-201ENST00000410361 191 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL513331.1-201ENST00000411908 397 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms