Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC024619.4-201ENST00000580924 316 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AP000769.2-201ENST00000602344 396 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AL451044.1-201ENST00000604867 238 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 MIR6780A-201ENST00000615089 68 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 AC073869.8-201ENST00000641806 335 ntBASIC6.05□□□□□ -1.44
TRIM47Q96LD4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM47Q96LD4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 SDAD1P1-202ENST00000524156 2051 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 U3.3-201ENST00000362986 216 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RNU6-61P-201ENST00000365528 109 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RNU6-658P-201ENST00000384606 106 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 EIF5P1-201ENST00000400019 1231 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC234781.4-201ENST00000419384 244 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 DDX39BP1-205ENST00000422507 192 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 MRPS21P2-201ENST00000424704 264 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 ELOCP18-201ENST00000434209 337 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AL356981.1-201ENST00000454879 684 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RPL23AP31-201ENST00000456160 467 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RPL36AP13-201ENST00000457490 317 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RPL21P8-201ENST00000465083 535 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC114982.1-201ENST00000469402 321 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AP001086.1-201ENST00000494882 321 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RPL7P47-201ENST00000497299 556 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC020893.1-201ENST00000502452 580 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 RN7SKP260-201ENST00000516907 149 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 SCARNA24.2-201ENST00000516968 130 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC012339.2-201ENST00000523996 453 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 MIR4284-201ENST00000578924 81 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.04□□□□□ -1.44
TRIM47Q96LD4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM47Q96LD4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 PRO1804-201ENST00000623780 2050 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 EIF2AP4-201ENST00000424793 1781 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC092747.4-201ENST00000620519 1861 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RNU6-511P-201ENST00000363496 107 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 Y_RNA.240-201ENST00000364469 95 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 SNORA24.1-201ENST00000384401 135 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RPL19P1-201ENST00000411635 428 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 VTI1BP4-201ENST00000427516 527 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 FTH1P1-201ENST00000437933 532 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC008267.6-201ENST00000441664 139 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RPL21P89-201ENST00000444021 467 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 PRDX3P3-201ENST00000447765 522 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC087884.1-201ENST00000469738 328 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC087385.1-201ENST00000475062 312 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RNU6-202P-201ENST00000515998 96 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 RNU2-10P-201ENST00000516375 211 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 SCARNA20.4-201ENST00000516969 131 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM47Q96LD4 MRPS18CP4-201ENST00000535821 231 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 AC093023.1-201ENST00000547375 507 ntBASIC6.03□□□□□ -1.44
TRIM47Q96LD4 ATP5J2P6-201ENST00000565203 266 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms