Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.03□□□□□ -1.92
USP47Q96K76 TRBV1-201ENST00000476502 284 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC104090.1-201ENST00000506341 1171 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC048346.1-201ENST00000510247 144 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC006518.2-201ENST00000542513 940 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC126177.3-201ENST00000551839 688 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.03□□□□□ -1.92
USP47Q96K76 AP002906.1-201ENST00000603405 233 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 AC006329.2-201ENST00000611491 394 ntBASIC3.03□□□□□ -1.92
USP47Q96K76 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.03□□□□□ -1.92
USP47Q96K76 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.03□□□□□ -1.92
USP47Q96K76 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.02□□□□□ -1.93
USP47Q96K76 RNU6-821P-201ENST00000390995 107 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 AF274854.1-201ENST00000413236 615 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP47Q96K76 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.02□□□□□ -1.93
USP47Q96K76 MTCO2P1-201ENST00000424648 477 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC084024.2-201ENST00000503480 791 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC107222.1-201ENST00000510899 637 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.02□□□□□ -1.93
USP47Q96K76 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
USP47Q96K76 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC107308.1-201ENST00000615897 301 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC010378.1-201ENST00000619270 362 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 AC040168.1-201ENST00000623594 991 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 AC244517.1-201ENST00000606030 2086 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
USP47Q96K76 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP47Q96K76 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.02□□□□□ -1.93
USP47Q96K76 AC002543.1-201ENST00000299783 1954 ntBASIC3.02□□□□□ -1.93
USP47Q96K76 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP47Q96K76 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.01□□□□□ -1.93
USP47Q96K76 SNORD82-201ENST00000365530 70 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 SNORD116-23-201ENST00000384645 92 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 MTCO2P31-201ENST00000402702 684 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AL139156.1-201ENST00000412785 841 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 SFR1P2-201ENST00000421841 730 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 AC005345.1-201ENST00000431868 217 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.01□□□□□ -1.93
USP47Q96K76 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 AL158053.1-201ENST00000441503 453 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 RPL23AP16-201ENST00000441715 421 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 MTCO3P2-201ENST00000457365 171 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 ARPC3P2-201ENST00000457786 533 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 PABPC1P3-201ENST00000469174 459 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 HSPE1P18-201ENST00000517602 280 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
USP47Q96K76 ZNF705CP-201ENST00000530515 889 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 OR4P1P-201ENST00000530808 1136 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 AC018630.1-201ENST00000541376 925 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 LRRC37A5P-203ENST00000580181 585 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AL109653.1-201ENST00000603091 248 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AC005776.1-201ENST00000603164 290 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 VN1R74P-201ENST00000613259 503 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 MIR6132-201ENST00000622083 109 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 AC097372.4-201ENST00000625025 466 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 BX649567.1-201ENST00000642071 1134 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.01□□□□□ -1.93
USP47Q96K76 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP47Q96K76 ZNF271P-202ENST00000465539 1970 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP47Q96K76 AC092881.1-201ENST00000638218 2733 ntBASIC3.01□□□□□ -1.93
USP47Q96K76 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.01□□□□□ -1.93
USP47Q96K76 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP47Q96K76 RNU6-582P-201ENST00000362989 107 ntBASIC3□□□□□ -1.93
USP47Q96K76 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 SNORA48.3-201ENST00000391081 134 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL591034.1-201ENST00000407447 340 ntBASIC3□□□□□ -1.93
USP47Q96K76 FCF1P2-201ENST00000415284 583 ntBASIC3□□□□□ -1.93
USP47Q96K76 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3□□□□□ -1.93
USP47Q96K76 UBE2D3P3-201ENST00000426992 425 ntBASIC3□□□□□ -1.93
USP47Q96K76 CR769767.1-201ENST00000436337 346 ntBASIC3□□□□□ -1.93
USP47Q96K76 RPL17P49-201ENST00000443728 411 ntBASIC3□□□□□ -1.93
USP47Q96K76 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3□□□□□ -1.93
USP47Q96K76 RPS20P24-201ENST00000457473 361 ntBASIC3□□□□□ -1.93
USP47Q96K76 VPS26AP1-201ENST00000483197 979 ntBASIC3□□□□□ -1.93
USP47Q96K76 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3□□□□□ -1.93
USP47Q96K76 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3□□□□□ -1.93
USP47Q96K76 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
USP47Q96K76 RNU6-334P-201ENST00000517072 102 ntBASIC3□□□□□ -1.93
USP47Q96K76 AP003049.1-201ENST00000529418 457 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
USP47Q96K76 MIR5002-201ENST00000584713 97 ntBASIC3□□□□□ -1.93
USP47Q96K76 AC002487.1-201ENST00000604565 994 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL512506.1-201ENST00000613918 449 ntBASIC3□□□□□ -1.93
USP47Q96K76 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3□□□□□ -1.93
USP47Q96K76 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3□□□□□ -1.93
USP47Q96K76 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP47Q96K76 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
USP47Q96K76 AL512283.1-201ENST00000606756 1384 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms