Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AL445183.3-201ENST00000414168 502 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 AL358176.2-201ENST00000425769 204 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 RPL23AP35-201ENST00000451906 501 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 OR7L1P-201ENST00000456181 380 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 RNA5SP436-201ENST00000516020 115 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.54□□□□□ -2.16
TTC28Q96AY4 AC083806.3-201ENST00000614016 455 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 LRRC77P-213ENST00000637727 880 ntBASIC1.54□□□□□ -2.16
TTC28Q96AY4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TTC28Q96AY4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TTC28Q96AY4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TTC28Q96AY4 PABPC1P9-201ENST00000426076 1612 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TTC28Q96AY4 MIR6073-201ENST00000352083 89 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AL589994.1-201ENST00000404962 340 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC28Q96AY4 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AL445687.1-201ENST00000439946 251 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 HMGN2P18-201ENST00000450680 270 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC243772.1-201ENST00000451620 410 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 MTCYBP18-201ENST00000501056 747 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC28Q96AY4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.53□□□□□ -2.16
TTC28Q96AY4 AC007687.1-201ENST00000602704 304 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 AL109653.1-201ENST00000603091 248 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 uc_338.12-201ENST00000616344 181 ntBASIC1.53□□□□□ -2.16
TTC28Q96AY4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TTC28Q96AY4 HMGN1P14-201ENST00000412459 517 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC012498.1-201ENST00000424037 437 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 AL139109.1-201ENST00000455491 297 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 RNU6-943P-201ENST00000516960 98 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AL845331.3-202ENST00000562856 261 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC013553.2-201ENST00000604244 589 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC098657.3-201ENST00000620434 263 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 GSTA12P-201ENST00000402398 508 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC013268.2-201ENST00000420753 337 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC107015.1-201ENST00000466902 747 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 HMGB3P15-201ENST00000507326 574 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 HMGN1P28-201ENST00000521340 364 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 AL159169.2-201ENST00000610061 1269 ntBASIC1.52□□□□□ -2.17
TTC28Q96AY4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
TTC28Q96AY4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TTC28Q96AY4 BTBD10P2-201ENST00000404779 676 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 HMGB1P12-201ENST00000438594 598 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 AL160237.3-201ENST00000604114 1013 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 AL138955.1-201ENST00000622881 1040 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 RNU6-178P-201ENST00000384631 104 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 RPL31P35-201ENST00000431058 377 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 CKS1BP5-201ENST00000434172 273 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 AL078601.1-201ENST00000444542 271 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 snoU13.3-201ENST00000459441 104 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 AC105313.1-201ENST00000509121 353 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 SNORD116-26-201ENST00000516006 96 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 DNAJC8P1-201ENST00000554535 372 ntBASIC1.51□□□□□ -2.17
TTC28Q96AY4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC28Q96AY4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
TTC28Q96AY4 RNU6-115P-201ENST00000364310 107 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 U3.37-201ENST00000408528 213 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 NEK4P1-201ENST00000433383 879 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 MTND2P2-201ENST00000434633 945 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 MTCO3P44-201ENST00000510977 541 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC139103.1-201ENST00000534696 1030 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.5□□□□□ -2.17
TTC28Q96AY4 SNORD39.2-201ENST00000579995 76 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AL109933.3-201ENST00000619095 188 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 MTND5P27-201ENST00000428871 1720 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 HMGB1P5-201ENST00000255320 642 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 RNU6-146P-201ENST00000384602 108 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 RN7SKP200-201ENST00000410564 320 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AC092638.1-201ENST00000411966 1275 ntBASIC1.5□□□□□ -2.17
TTC28Q96AY4 AIMP1P2-201ENST00000425294 312 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms