Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RPS15AP34-201ENST00000487776 387 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC025768.1-201ENST00000510057 267 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 OR5BM1P-201ENST00000512021 366 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 RNA5SP471-201ENST00000516971 106 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC040168.1-201ENST00000623594 991 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC112Q8NEF3 AC097714.1-201ENST00000511272 1647 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 RNU6-444P-201ENST00000383988 108 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 SNORA67.4-201ENST00000384688 142 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 TAS2R15P-201ENST00000390674 928 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 ATP5F1P6-201ENST00000402768 767 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 MTCO1P39-201ENST00000426148 480 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL035410.1-201ENST00000427409 427 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL021397.1-201ENST00000451806 248 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC025033.1-201ENST00000463883 194 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 ANXA2P1-201ENST00000505539 926 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC234781.5-201ENST00000508429 271 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AP003122.3-201ENST00000526316 255 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC009063.1-201ENST00000563342 702 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 VN1R78P-201ENST00000597393 564 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AL359757.2-201ENST00000624309 274 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC093591.3-201ENST00000634516 308 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC010680.1-201ENST00000590024 3590 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 AC008432.1-201ENST00000615912 1320 ntBASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC112Q8NEF3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RNU6-1339P-201ENST00000363574 91 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC083799.1-201ENST00000366451 910 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 CYCSP45-201ENST00000402289 315 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RNA5SP425-201ENST00000410336 112 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 UBE2V1P9-201ENST00000414760 368 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 Z75741.2-201ENST00000417272 1167 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 PAICSP7-201ENST00000419829 962 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 PNRC2P1-201ENST00000423940 420 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 CABYRP1-201ENST00000465493 1045 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RBM43P1-201ENST00000476891 1081 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RPL23AP49-201ENST00000492925 468 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RPS27P26-201ENST00000494583 239 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 SNORA70.16-201ENST00000516390 95 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC004217.3-201ENST00000551552 878 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AC025918.2-201ENST00000558683 763 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 MIR3609-201ENST00000582661 80 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 MIR4448-201ENST00000584360 86 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 DNAJC19P3-201ENST00000594491 331 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AL136363.1-201ENST00000605349 337 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 BX322635.1-201ENST00000605804 496 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 VN1R74P-201ENST00000613259 503 ntBASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC112Q8NEF3 SEC63P2-201ENST00000503863 1939 ntBASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.4□□□□□ -2.02
CCDC112Q8NEF3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms