Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 BNIP3P25-201ENST00000596023 559 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 SNRPGP17-201ENST00000603780 214 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 uc_338.15-201ENST00000615470 191 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC004825.2-201ENST00000616634 455 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 U3.53-201ENST00000628922 216 ntBASIC4.03□□□□□ -1.76
CPEB3Q8NE35 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.03□□□□□ -1.76
CPEB3Q8NE35 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
CPEB3Q8NE35 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.03□□□□□ -1.77
CPEB3Q8NE35 AL391684.1-202ENST00000641293 1636 ntBASIC4.03□□□□□ -1.77
CPEB3Q8NE35 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MTND4P14-201ENST00000435799 1354 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 ZNF137P-201ENST00000456718 1920 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 SNORA63C-201ENST00000364578 129 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNA5SP513-201ENST00000364648 118 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 SNORA4.3-201ENST00000365564 137 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU5E-6P-201ENST00000365574 115 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 Y_RNA.378-201ENST00000365652 113 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU4-14P-201ENST00000410858 122 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 ARL5AP1-201ENST00000418991 388 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC008065.1-201ENST00000428525 348 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC005094.1-201ENST00000440420 368 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RPL21P133-201ENST00000443666 476 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AL645939.1-201ENST00000453429 797 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 ISCUP1-201ENST00000454451 448 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 SNRPFP3-201ENST00000457792 225 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU6-1208P-201ENST00000459588 107 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC010326.1-201ENST00000462726 602 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC010469.1-201ENST00000463864 576 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC135721.1-201ENST00000497954 479 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC007016.1-201ENST00000512110 244 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU6-1170P-201ENST00000515974 106 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU6-559P-201ENST00000516151 98 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RNU6-1038P-201ENST00000516516 104 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AL352979.3-201ENST00000553515 247 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MIR5583-1-201ENST00000580941 59 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MIR3942-201ENST00000585264 109 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC092807.2-201ENST00000609367 243 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MIR6780A-201ENST00000615089 68 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 uc_338.34-201ENST00000617467 174 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 MTND4LP32-201ENST00000636111 270 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CPEB3Q8NE35 BDP1P-201ENST00000582658 1990 ntBASIC4.02□□□□□ -1.77
CPEB3Q8NE35 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 AC021146.4-201ENST00000309229 279 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 MIR369-201ENST00000362155 70 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 RNU6-179P-201ENST00000363350 107 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 Y_RNA.216-201ENST00000364205 93 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 Y_RNA.339-201ENST00000365325 102 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 RNU6-1297P-201ENST00000384415 104 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 SDHCP2-201ENST00000398565 501 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 RNA5SP107-201ENST00000411358 122 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.01□□□□□ -1.77
CPEB3Q8NE35 RPL36AP6-201ENST00000435770 321 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
CPEB3Q8NE35 CEACAMP6-201ENST00000452007 574 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms