Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
VPS8Q8N3P4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS8Q8N3P4 AC012493.3-201ENST00000604494 112 ntBASIC2.38□□□□□ -2.03
VPS8Q8N3P4 AC138915.1-201ENST00000565427 1685 ntBASIC2.38□□□□□ -2.03
VPS8Q8N3P4 AC096656.1-201ENST00000623826 1364 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 SNRPEP2-201ENST00000397592 279 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 RNU4-65P-201ENST00000410473 140 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS8Q8N3P4 SNRPEP4-201ENST00000435815 279 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS8Q8N3P4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VPS8Q8N3P4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS8Q8N3P4 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 MTCYBP41-201ENST00000528913 1123 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS8Q8N3P4 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
VPS8Q8N3P4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 RNU6-799P-201ENST00000363567 107 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 MIR517C-201ENST00000385103 95 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 RPS7P9-201ENST00000414704 586 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 ARL5AP2-201ENST00000444698 533 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 RPS29P29-201ENST00000456396 171 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 AC140059.1-201ENST00000489238 361 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 AC087373.1-201ENST00000524920 491 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 AP005435.4-201ENST00000529514 284 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 VN1R81P-201ENST00000602085 372 ntBASIC2.36□□□□□ -2.03
VPS8Q8N3P4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS8Q8N3P4 AC093536.2-201ENST00000565257 1406 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 MTATP6P4-201ENST00000427725 675 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AC135721.1-201ENST00000497954 479 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AC021146.7-201ENST00000509604 775 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 MTCO3P44-201ENST00000510977 541 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 SNORA31.24-201ENST00000517232 57 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AC126177.3-201ENST00000551839 688 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AL133507.1-201ENST00000605269 557 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AL161734.1-201ENST00000609720 557 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 uc_338.5-201ENST00000611839 155 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AC008083.4-201ENST00000615076 444 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS8Q8N3P4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 AP001350.1-201ENST00000601906 1524 ntBASIC2.35□□□□□ -2.03
VPS8Q8N3P4 Y_RNA.226-201ENST00000364337 114 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AC013404.1-201ENST00000413068 249 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AC092447.6-201ENST00000414578 210 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AL353729.1-201ENST00000425044 720 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 ELOCP11-201ENST00000436690 332 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 ELOCP16-201ENST00000444494 332 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 Z99714.1-201ENST00000450463 807 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 SNORD53B-201ENST00000577887 78 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AP003117.1-201ENST00000602771 554 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 AC009220.3-201ENST00000604318 586 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS8Q8N3P4 ZNF734P-201ENST00000419494 1534 ntBASIC2.34□□□□□ -2.03
VPS8Q8N3P4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 RNU1-42P-201ENST00000364033 160 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 RNA5SP363-201ENST00000365072 115 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 MT-TP-201ENST00000387461 68 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL030996.1-201ENST00000411430 235 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 ISCA1P6-201ENST00000427740 390 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 RNA5SP468-201ENST00000516782 93 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC026241.1-201ENST00000517873 2142 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 NBEAP1-201ENST00000554452 979 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.6-201ENST00000603753 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.11-201ENST00000604059 253 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.10-201ENST00000604330 253 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AC008162.1-201ENST00000604718 254 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.1-201ENST00000604752 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.2-201ENST00000604983 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.5-201ENST00000605253 252 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.4-201ENST00000605279 254 ntBASIC2.34□□□□□ -2.04
VPS8Q8N3P4 AL670379.12-201ENST00000605291 253 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms