Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SETP7-201ENST00000552169 453 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MIR3670-2-201ENST00000582974 65 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MIR3670-1-201ENST00000584160 65 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MIR3670-3-201ENST00000584855 65 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 BNIP3P24-201ENST00000593398 557 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC069304.2-201ENST00000605154 435 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC069545.1-201ENST00000605671 358 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AL161734.1-201ENST00000609720 557 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MIR3670-4-201ENST00000612260 65 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC005332.6-201ENST00000613178 446 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC095031.1-201ENST00000623685 672 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AL138960.2-201ENST00000625145 535 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RNU5D-1-201ENST00000363299 116 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RNU1-100P-201ENST00000365255 165 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 ANAPC10P1-201ENST00000395991 556 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 SNRPEP2-201ENST00000397592 279 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AL356057.3-201ENST00000402607 340 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC068533.2-201ENST00000411872 306 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC007435.1-201ENST00000421086 415 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC007742.1-201ENST00000425789 329 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RPL36AP6-201ENST00000435770 321 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 ELOCP26-201ENST00000436067 329 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RFC5P1-201ENST00000454419 874 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RPS15AP17-201ENST00000470598 390 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC026801.2-201ENST00000515352 425 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 RN7SKP132-201ENST00000516001 208 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 FAM60BP-201ENST00000578364 658 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 ATP1B3P1-201ENST00000605365 821 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC007619.2-201ENST00000605743 379 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC024257.5-201ENST00000612739 531 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC006386.2-201ENST00000624491 75 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC012005.1-201ENST00000624575 75 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 AC107982.1-201ENST00000507171 1300 ntBASIC2.92□□□□□ -1.94
CCDC65Q8IXS2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 RNU6-878P-201ENST00000384578 110 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL136372.1-201ENST00000403060 228 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 RNU2-47P-201ENST00000410649 186 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 Z92545.1-201ENST00000411782 234 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 RPS15AP38-201ENST00000413110 372 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 USP9YP22-201ENST00000438971 294 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC026410.2-201ENST00000460281 156 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC034159.1-201ENST00000513885 583 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1225P-201ENST00000516336 65 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 HIGD1AP17-201ENST00000554576 276 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 GTF3AP2-201ENST00000557014 266 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 HSPE1P3-201ENST00000559254 309 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 LARP7P3-201ENST00000579888 337 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL137843.1-201ENST00000605078 385 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL049777.1-201ENST00000622740 518 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 AL356585.4-201ENST00000623078 1229 ntBASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC65Q8IXS2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 RNU6-859P-201ENST00000362728 107 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 RNA5SP210-201ENST00000391034 120 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL592310.1-201ENST00000414330 671 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 RPLP0P7-201ENST00000416050 667 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL449283.1-202ENST00000418249 604 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 AL137014.1-201ENST00000420490 1226 ntBASIC2.9□□□□□ -1.95
CCDC65Q8IXS2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms