Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.55□□□□□ -1.84
USP43Q70EL4 RPL39P6-201ENST00000448289 150 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 RPL38P1-201ENST00000460914 211 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.55□□□□□ -1.84
USP43Q70EL4 FAM172BP-201ENST00000487497 1089 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 RPL39P36-201ENST00000490784 156 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 RPS27AP13-201ENST00000498403 237 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 HMGB1P21-201ENST00000502313 581 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AC008958.1-201ENST00000511047 682 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 SNORA48.10-201ENST00000516965 160 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 RNU6-430P-201ENST00000517078 107 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 MTCO2P4-201ENST00000517968 247 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.55□□□□□ -1.84
USP43Q70EL4 HIGD1AP6-201ENST00000521833 279 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 OR5AP1P-201ENST00000529730 940 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AL157687.1-201ENST00000554853 619 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.55□□□□□ -1.84
USP43Q70EL4 MIR5697-201ENST00000578045 78 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AC013553.2-201ENST00000604244 589 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AL132765.2-201ENST00000610812 351 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP43Q70EL4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.55□□□□□ -1.84
USP43Q70EL4 AL445363.3-201ENST00000623080 671 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.55□□□□□ -1.84
USP43Q70EL4 MIR1321-201ENST00000637766 79 ntBASIC3.55□□□□□ -1.84
USP43Q70EL4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP43Q70EL4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP43Q70EL4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
USP43Q70EL4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP43Q70EL4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.55□□□□□ -1.84
USP43Q70EL4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
USP43Q70EL4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
USP43Q70EL4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 MIR554-201ENST00000384874 96 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC109780.2-201ENST00000413467 845 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 HMGB1P11-201ENST00000413899 637 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 MTCO3P12-201ENST00000416718 547 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 MTCO1P20-201ENST00000425366 358 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.54□□□□□ -1.84
USP43Q70EL4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 RPL37P21-201ENST00000435890 276 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 PGBD4P3-201ENST00000440731 581 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.54□□□□□ -1.84
USP43Q70EL4 IPO7P1-201ENST00000442031 636 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AL162151.2-201ENST00000448875 158 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.54□□□□□ -1.84
USP43Q70EL4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 TRGVB-201ENST00000453257 471 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 NF1P3-201ENST00000457709 450 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 SNORD108-201ENST00000459332 71 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC092757.1-201ENST00000467293 467 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC034236.1-201ENST00000469891 373 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.54□□□□□ -1.84
USP43Q70EL4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 RN7SL132P-201ENST00000478131 296 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 RPS3AP14-201ENST00000483907 780 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 KLRA1P-201ENST00000503499 986 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC110792.2-201ENST00000510278 224 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 RNU6-583P-201ENST00000516012 92 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 RNA5SP216-201ENST00000516111 123 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 RN7SKP209-201ENST00000516888 304 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AP001893.2-201ENST00000526949 202 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC020661.2-201ENST00000560114 134 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC026470.2-201ENST00000561492 181 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC090751.1-201ENST00000566966 267 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC034268.2-201ENST00000571784 482 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 MIR4429-201ENST00000580105 73 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC115085.1-201ENST00000588924 229 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AC067852.4-201ENST00000590314 478 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 FAM27D1-201ENST00000612308 341 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.54□□□□□ -1.84
USP43Q70EL4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC104010.1-201ENST00000616889 150 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP43Q70EL4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.54□□□□□ -1.84
USP43Q70EL4 AC005183.1-201ENST00000603687 1979 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
USP43Q70EL4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms